STRINGSTRING
nrp1 nrp1 LOC105939829 LOC105939829 vegfb vegfb flt1 flt1 pgf pgf LOC105928007 LOC105928007 LOC105931924 LOC105931924 mapkapk2 mapkapk2 vegfa vegfa ENSFHEP00000026972 ENSFHEP00000026972 LOC105915295 LOC105915295 LOC105928008 LOC105928008
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
nrp1Neuropilin; Belongs to the neuropilin family. (924 aa)
LOC105939829Fibroblast growth factor 18a; Belongs to the heparin-binding growth factors family. (210 aa)
vegfbPDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (256 aa)
flt1Vascular endothelial growth factor receptor 1; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1273 aa)
pgfPDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (136 aa)
LOC105928007Heat shock protein, alpha-crystallin-related, 1; Belongs to the small heat shock protein (HSP20) family. (202 aa)
LOC105931924Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (210 aa)
mapkapk2MAPK activated protein kinase 2a; Belongs to the protein kinase superfamily. (403 aa)
vegfaVascular endothelial growth factor Ab; Belongs to the PDGF/VEGF growth factor family. (214 aa)
ENSFHEP00000026972Vascular endothelial growth factor D; Belongs to the PDGF/VEGF growth factor family. (268 aa)
LOC105915295Heat shock protein, alpha-crystallin-related, b15; Belongs to the small heat shock protein (HSP20) family. (203 aa)
LOC105928008Heat shock protein, alpha-crystallin-related, 1; Belongs to the small heat shock protein (HSP20) family. (202 aa)
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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