(14 nodes) Set1C/COMPASS complex network (Fundulus heteroclitus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCFC1	Host cell factor C1 (VP16-accessory protein). (1711 aa)
	setd1a	SET domain containing 1A, histone lysine methyltransferase. (2016 aa)
	dpy30	Dpy-30 histone methyltransferase complex regulatory subunit. (146 aa)
	LOC105937895	Uncharacterized protein. (336 aa)
	setd1b	SET domain containing 1B, histone lysine methyltransferase a. (1819 aa)
	wdr5	WD repeat domain 5. (333 aa)
	ash2l	Ash2 like, histone lysine methyltransferase complex subunit. (593 aa)
	LOC105919253	CXXC finger protein 1a. (550 aa)
	rbbp5	Retinoblastoma binding protein 5. (507 aa)
	cxxc1	CXXC finger protein 1b. (540 aa)
	LOC105927193	WD_REPEATS_REGION domain-containing protein. (434 aa)
	ENSFHEP00000031730	Uncharacterized protein. (304 aa)
	hcfc2	Host cell factor C2. (734 aa)
	wdr82	WD repeat-containing protein 82. (313 aa)

Your Current Organism:

Fundulus heteroclitus

NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSFHEP00000031730	HCFC1	ENSFHEP00000031730	ENSFHEP00000022256	Uncharacterized protein.	Host cell factor C1 (VP16-accessory protein).	0.933
ENSFHEP00000031730	LOC105919253	ENSFHEP00000031730	ENSFHEP00000015987	Uncharacterized protein.	CXXC finger protein 1a.	0.623
ENSFHEP00000031730	LOC105927193	ENSFHEP00000031730	ENSFHEP00000023374	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.630
ENSFHEP00000031730	LOC105937895	ENSFHEP00000031730	ENSFHEP00000009766	Uncharacterized protein.	Uncharacterized protein.	0.536
ENSFHEP00000031730	ash2l	ENSFHEP00000031730	ENSFHEP00000015495	Uncharacterized protein.	Ash2 like, histone lysine methyltransferase complex subunit.	0.896
ENSFHEP00000031730	cxxc1	ENSFHEP00000031730	ENSFHEP00000018308	Uncharacterized protein.	CXXC finger protein 1b.	0.623
ENSFHEP00000031730	dpy30	ENSFHEP00000031730	ENSFHEP00000005580	Uncharacterized protein.	Dpy-30 histone methyltransferase complex regulatory subunit.	0.712
ENSFHEP00000031730	hcfc2	ENSFHEP00000031730	ENSFHEP00000032036	Uncharacterized protein.	Host cell factor C2.	0.934
ENSFHEP00000031730	rbbp5	ENSFHEP00000031730	ENSFHEP00000018195	Uncharacterized protein.	Retinoblastoma binding protein 5.	0.800
ENSFHEP00000031730	setd1a	ENSFHEP00000031730	ENSFHEP00000000199	Uncharacterized protein.	SET domain containing 1A, histone lysine methyltransferase.	0.771
ENSFHEP00000031730	setd1b	ENSFHEP00000031730	ENSFHEP00000011692	Uncharacterized protein.	SET domain containing 1B, histone lysine methyltransferase a.	0.771
ENSFHEP00000031730	wdr5	ENSFHEP00000031730	ENSFHEP00000013127	Uncharacterized protein.	WD repeat domain 5.	0.864
ENSFHEP00000031730	wdr82	ENSFHEP00000031730	ENSFHEP00000032466	Uncharacterized protein.	WD repeat-containing protein 82.	0.702
HCFC1	ENSFHEP00000031730	ENSFHEP00000022256	ENSFHEP00000031730	Host cell factor C1 (VP16-accessory protein).	Uncharacterized protein.	0.933
HCFC1	LOC105919253	ENSFHEP00000022256	ENSFHEP00000015987	Host cell factor C1 (VP16-accessory protein).	CXXC finger protein 1a.	0.623
HCFC1	LOC105927193	ENSFHEP00000022256	ENSFHEP00000023374	Host cell factor C1 (VP16-accessory protein).	WD_REPEATS_REGION domain-containing protein.	0.630
HCFC1	LOC105937895	ENSFHEP00000022256	ENSFHEP00000009766	Host cell factor C1 (VP16-accessory protein).	Uncharacterized protein.	0.536
HCFC1	ash2l	ENSFHEP00000022256	ENSFHEP00000015495	Host cell factor C1 (VP16-accessory protein).	Ash2 like, histone lysine methyltransferase complex subunit.	0.896
HCFC1	cxxc1	ENSFHEP00000022256	ENSFHEP00000018308	Host cell factor C1 (VP16-accessory protein).	CXXC finger protein 1b.	0.623
HCFC1	dpy30	ENSFHEP00000022256	ENSFHEP00000005580	Host cell factor C1 (VP16-accessory protein).	Dpy-30 histone methyltransferase complex regulatory subunit.	0.712