STRINGSTRING
ENSFHEP00000026972 ENSFHEP00000026972 alkbh1 alkbh1 LOC105933677 LOC105933677 mst1r mst1r LOC105929045 LOC105929045 scrib scrib pgf pgf ENSFHEP00000032510 ENSFHEP00000032510 LOC105915406 LOC105915406 ENSFHEP00000007623 ENSFHEP00000007623 tsc2 tsc2 ENSFHEP00000007001 ENSFHEP00000007001 LOC105932928 LOC105932928 fgf7 fgf7 vegfb vegfb LOC105935935 LOC105935935 ENSFHEP00000019110 ENSFHEP00000019110 LOC105933547 LOC105933547 vegfa vegfa met met
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSFHEP00000026972Vascular endothelial growth factor D; Belongs to the PDGF/VEGF growth factor family. (268 aa)
alkbh1AlkB homolog 1, histone H2A dioxygenase. (380 aa)
LOC105933677Macrophage stimulating 1 receptor a. (1409 aa)
mst1rMacrophage-stimulating protein receptor. (1375 aa)
LOC105929045Galectin. (333 aa)
scribScribble planar cell polarity protein. (1730 aa)
pgfPDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (136 aa)
ENSFHEP00000032510PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (133 aa)
LOC105915406Platelet-derived growth factor beta polypeptide a; Belongs to the PDGF/VEGF growth factor family. (561 aa)
ENSFHEP00000007623Uncharacterized protein. (243 aa)
tsc2TSC complex subunit 2. (1700 aa)
ENSFHEP00000007001Neurotrophin-3; Seems to promote the survival of visceral and proprioceptive sensory neurons; Belongs to the NGF-beta family. (253 aa)
LOC105932928Galectin. (373 aa)
fgf7Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (199 aa)
vegfbPDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (256 aa)
LOC105935935Secretogranin II (chromogranin C), b. (592 aa)
ENSFHEP00000019110Uncharacterized protein. (584 aa)
LOC105933547Platelet-derived growth factor beta polypeptide b; Belongs to the PDGF/VEGF growth factor family. (523 aa)
vegfaVascular endothelial growth factor Ab; Belongs to the PDGF/VEGF growth factor family. (214 aa)
metMET proto-oncogene, receptor tyrosine kinase. (1372 aa)
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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