14 items (Fundulus heteroclitus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC105920559	Heat shock protein 4b. (785 aa)
	tmem35a	Transmembrane protein 35. (161 aa)
	mkks	McKusick-Kaufman/Bardet-Biedl syndromes chaperonin, putative. (614 aa)
	pfdn6	Prefoldin subunit 6. (126 aa)
	psmg3	Proteasome (prosome, macropain) assembly chaperone 3. (121 aa)
	cct2	Chaperonin containing TCP1, subunit 2 (beta). (488 aa)
	psmg1	Uncharacterized protein. (280 aa)
	psmg2	Proteasome (prosome, macropain) assembly chaperone 2. (301 aa)
	LOC105923618	Lon peptidase 1, mitochondrial. (346 aa)
	ndufaf1	NADH:ubiquinone oxidoreductase complex assembly factor 1. (304 aa)
	LOC105935681	Heat shock protein 4a. (838 aa)
	bbs10	Uncharacterized protein. (660 aa)
	LOC105915740	Alanyl-tRNA editing Aarsd1-like protein. (164 aa)
	bbs12	T-complex protein 1 subunit theta. (614 aa)

Your Current Organism:

Fundulus heteroclitus

NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC105915740	LOC105920559	ENSFHEP00000017536	ENSFHEP00000009847	Alanyl-tRNA editing Aarsd1-like protein.	Heat shock protein 4b.	0.510
LOC105915740	LOC105935681	ENSFHEP00000017536	ENSFHEP00000023515	Alanyl-tRNA editing Aarsd1-like protein.	Heat shock protein 4a.	0.510
LOC105915740	cct2	ENSFHEP00000017536	ENSFHEP00000011967	Alanyl-tRNA editing Aarsd1-like protein.	Chaperonin containing TCP1, subunit 2 (beta).	0.460
LOC105920559	LOC105915740	ENSFHEP00000009847	ENSFHEP00000017536	Heat shock protein 4b.	Alanyl-tRNA editing Aarsd1-like protein.	0.510
LOC105920559	LOC105935681	ENSFHEP00000009847	ENSFHEP00000023515	Heat shock protein 4b.	Heat shock protein 4a.	0.953
LOC105920559	bbs10	ENSFHEP00000009847	ENSFHEP00000023233	Heat shock protein 4b.	Uncharacterized protein.	0.553
LOC105920559	cct2	ENSFHEP00000009847	ENSFHEP00000011967	Heat shock protein 4b.	Chaperonin containing TCP1, subunit 2 (beta).	0.665
LOC105920559	mkks	ENSFHEP00000009847	ENSFHEP00000034449	Heat shock protein 4b.	McKusick-Kaufman/Bardet-Biedl syndromes chaperonin, putative.	0.553
LOC105923618	bbs10	ENSFHEP00000027395	ENSFHEP00000023233	Lon peptidase 1, mitochondrial.	Uncharacterized protein.	0.541
LOC105923618	cct2	ENSFHEP00000027395	ENSFHEP00000011967	Lon peptidase 1, mitochondrial.	Chaperonin containing TCP1, subunit 2 (beta).	0.575
LOC105923618	mkks	ENSFHEP00000027395	ENSFHEP00000034449	Lon peptidase 1, mitochondrial.	McKusick-Kaufman/Bardet-Biedl syndromes chaperonin, putative.	0.541
LOC105935681	LOC105915740	ENSFHEP00000023515	ENSFHEP00000017536	Heat shock protein 4a.	Alanyl-tRNA editing Aarsd1-like protein.	0.510
LOC105935681	LOC105920559	ENSFHEP00000023515	ENSFHEP00000009847	Heat shock protein 4a.	Heat shock protein 4b.	0.953
LOC105935681	bbs10	ENSFHEP00000023515	ENSFHEP00000023233	Heat shock protein 4a.	Uncharacterized protein.	0.553
LOC105935681	cct2	ENSFHEP00000023515	ENSFHEP00000011967	Heat shock protein 4a.	Chaperonin containing TCP1, subunit 2 (beta).	0.665
LOC105935681	mkks	ENSFHEP00000023515	ENSFHEP00000034449	Heat shock protein 4a.	McKusick-Kaufman/Bardet-Biedl syndromes chaperonin, putative.	0.553
bbs10	LOC105920559	ENSFHEP00000023233	ENSFHEP00000009847	Uncharacterized protein.	Heat shock protein 4b.	0.553
bbs10	LOC105923618	ENSFHEP00000023233	ENSFHEP00000027395	Uncharacterized protein.	Lon peptidase 1, mitochondrial.	0.541
bbs10	LOC105935681	ENSFHEP00000023233	ENSFHEP00000023515	Uncharacterized protein.	Heat shock protein 4a.	0.553
bbs10	bbs12	ENSFHEP00000023233	ENSFHEP00000015817	Uncharacterized protein.	T-complex protein 1 subunit theta.	0.904