(24 nodes) Positive regulation of filopodium assembly network (Fundulus heteroclitus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	bcas3	BCAS3 microtubule associated cell migration factor. (949 aa)
	ripor2	RHO family interacting cell polarization regulator 2. (1132 aa)
	LOC105931589	Uncharacterized protein. (191 aa)
	LOC105931543	Uncharacterized protein. (191 aa)
	agrn	Agrin. (1920 aa)
	fmr1	Fragile X mental retardation 1. (604 aa)
	LOC105935361	Paralemmin 1b. (227 aa)
	GPM6A	Glycoprotein M6Ab. (252 aa)
	fnbp1l	Formin binding protein 1-like. (558 aa)
	srf	Serum response factor b. (599 aa)
	LOC105918040	Dihydropyrimidinase-related protein 4. (575 aa)
	LOC105929153	Teneurin transmembrane protein 1. (2617 aa)
	LOC105920783	Myosin IIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (632 aa)
	ENSFHEP00000024724	Protein kinase domain-containing protein. (56 aa)
	LOC105936224	Glycoprotein M6Aa. (281 aa)
	nrp1	Neuropilin; Belongs to the neuropilin family. (924 aa)
	mien1	Uncharacterized protein. (138 aa)
	LOC105934100	Cell division control protein 42. (191 aa)
	myo3a	Myosin IIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1679 aa)
	LOC105928568	Cell division control protein 42. (191 aa)
	CDC42	Cell division control protein 42. (191 aa)
	LOC105924010	Uncharacterized protein. (323 aa)
	ENSFHEP00000008409	PL48 domain-containing protein. (290 aa)
	ENSFHEP00000034979	Paralemmin 1a. (346 aa)

Your Current Organism:

Fundulus heteroclitus

NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC42	ENSFHEP00000024724	ENSFHEP00000032957	ENSFHEP00000024724	Cell division control protein 42.	Protein kinase domain-containing protein.	0.566
CDC42	LOC105920783	ENSFHEP00000032957	ENSFHEP00000024697	Cell division control protein 42.	Myosin IIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.566
CDC42	LOC105931543	ENSFHEP00000032957	ENSFHEP00000011007	Cell division control protein 42.	Uncharacterized protein.	0.892
CDC42	LOC105931589	ENSFHEP00000032957	ENSFHEP00000011025	Cell division control protein 42.	Uncharacterized protein.	0.897
CDC42	LOC105934100	ENSFHEP00000032957	ENSFHEP00000001271	Cell division control protein 42.	Cell division control protein 42.	0.897
CDC42	fnbp1l	ENSFHEP00000032957	ENSFHEP00000008569	Cell division control protein 42.	Formin binding protein 1-like.	0.799
CDC42	myo3a	ENSFHEP00000032957	ENSFHEP00000001852	Cell division control protein 42.	Myosin IIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.566
ENSFHEP00000024724	CDC42	ENSFHEP00000024724	ENSFHEP00000032957	Protein kinase domain-containing protein.	Cell division control protein 42.	0.566
ENSFHEP00000024724	LOC105928568	ENSFHEP00000024724	ENSFHEP00000003652	Protein kinase domain-containing protein.	Cell division control protein 42.	0.566
ENSFHEP00000024724	LOC105931543	ENSFHEP00000024724	ENSFHEP00000011007	Protein kinase domain-containing protein.	Uncharacterized protein.	0.566
ENSFHEP00000024724	LOC105931589	ENSFHEP00000024724	ENSFHEP00000011025	Protein kinase domain-containing protein.	Uncharacterized protein.	0.566
ENSFHEP00000024724	LOC105934100	ENSFHEP00000024724	ENSFHEP00000001271	Protein kinase domain-containing protein.	Cell division control protein 42.	0.566
LOC105918040	nrp1	ENSFHEP00000013141	ENSFHEP00000032633	Dihydropyrimidinase-related protein 4.	Neuropilin; Belongs to the neuropilin family.	0.511
LOC105920783	CDC42	ENSFHEP00000024697	ENSFHEP00000032957	Myosin IIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Cell division control protein 42.	0.566
LOC105920783	LOC105928568	ENSFHEP00000024697	ENSFHEP00000003652	Myosin IIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Cell division control protein 42.	0.566
LOC105920783	LOC105931543	ENSFHEP00000024697	ENSFHEP00000011007	Myosin IIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.566
LOC105920783	LOC105931589	ENSFHEP00000024697	ENSFHEP00000011025	Myosin IIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.566
LOC105920783	LOC105934100	ENSFHEP00000024697	ENSFHEP00000001271	Myosin IIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Cell division control protein 42.	0.566
LOC105920783	myo3a	ENSFHEP00000024697	ENSFHEP00000001852	Myosin IIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Myosin IIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.706
LOC105924010	srf	ENSFHEP00000004618	ENSFHEP00000013718	Uncharacterized protein.	Serum response factor b.	0.933