STRINGSTRING
RNF207 RNF207 LOC105932879 LOC105932879 LOC105918962 LOC105918962 ENSFHEP00000011452 ENSFHEP00000011452 LOC105916916 LOC105916916 LOC105919124 LOC105919124 scn4b scn4b LOC105928740 LOC105928740 ENSFHEP00000022273 ENSFHEP00000022273 zmpste24 zmpste24 gja5 gja5 kcne4 kcne4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RNF207Ring finger protein 207. (631 aa)
LOC105932879PID domain-containing protein. (731 aa)
LOC105918962Potassium voltage-gated channel, KQT-like subfamily, member 1.1; Belongs to the potassium channel family. (624 aa)
ENSFHEP00000011452Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (405 aa)
LOC105916916Ig-like domain-containing protein. (222 aa)
LOC105919124Sodium channel, voltage-gated, type I, beta a. (225 aa)
scn4bSodium channel, voltage-gated, type IV, beta a. (233 aa)
LOC105928740Si:dkey-34e4.1. (661 aa)
ENSFHEP00000022273Uncharacterized protein; Belongs to the potassium channel family. (590 aa)
zmpste24CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (433 aa)
gja5Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (380 aa)
kcne4Potassium voltage-gated channel, Isk-related family, member 4. (186 aa)
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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