STRINGSTRING
LOC105930854 LOC105930854 TGFB3 TGFB3 LOC105940217 LOC105940217 msx1 msx1 LOC105924010 LOC105924010 specc1l specc1l LOC105923943 LOC105923943 LOC105921308 LOC105921308 ednra ednra crispld2 crispld2 sgpl1 sgpl1 bbs4 bbs4 srf srf tgfb3 tgfb3 ep300 ep300 LOC105933078 LOC105933078 LOC105931884 LOC105931884 zfand5 zfand5 lef1 lef1 ENSFHEP00000025036 ENSFHEP00000025036 pitx2 pitx2 LOC105925979 LOC105925979 LOC105938432 LOC105938432 LOC105930240 LOC105930240 crispld1 crispld1 ankrd11 ankrd11 LOC105938776 LOC105938776 mkks mkks LOC105936437 LOC105936437
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC105930854E1A binding protein p300 a. (2838 aa)
TGFB3Transforming growth factor beta; Belongs to the TGF-beta family. (408 aa)
LOC105940217Dickkopf WNT signaling pathway inhibitor 1a. (261 aa)
msx1Muscle segment homeobox 1a. (281 aa)
LOC105924010Uncharacterized protein. (323 aa)
specc1lSperm antigen with calponin homology and coiled-coil domains 1-like a. (1129 aa)
LOC105923943Asp-B-Hydro_N domain-containing protein. (201 aa)
LOC105921308Endothelin receptor type Ab; Belongs to the G-protein coupled receptor 1 family. (410 aa)
ednraG_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (448 aa)
crispld2Cysteine-rich secretory protein LCCL domain containing 2. (518 aa)
sgpl1Sphingosine-1-phosphate lyase 1. (565 aa)
bbs4Bardet-Biedl syndrome 4. (544 aa)
srfSerum response factor b. (599 aa)
tgfb3Transforming growth factor beta; Belongs to the TGF-beta family. (401 aa)
ep300E1A binding protein p300 b. (2738 aa)
LOC105933078Transforming growth factor beta; Belongs to the TGF-beta family. (381 aa)
LOC105931884Uncharacterized protein. (622 aa)
zfand5Zinc finger, AN1-type domain 5a. (205 aa)
lef1Lymphoid enhancer-binding factor 1. (424 aa)
ENSFHEP00000025036Asp-B-Hydro_N domain-containing protein. (238 aa)
pitx2Homeobox protein. (312 aa)
LOC105925979Si:ch211-195o20.7. (596 aa)
LOC105938432Cysteine-serine-rich nuclear protein 1b. (570 aa)
LOC105930240Cysteine-serine-rich nuclear protein 1a. (576 aa)
crispld1Cysteine-rich secretory protein LCCL domain containing 1a. (517 aa)
ankrd11Ankyrin repeat domain 11. (2834 aa)
LOC105938776Calponin-homology (CH) domain-containing protein. (570 aa)
mkksMcKusick-Kaufman/Bardet-Biedl syndromes chaperonin, putative. (614 aa)
LOC105936437Cysteine-rich secretory protein LCCL domain containing 1b. (468 aa)
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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