65 items (Fundulus heteroclitus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	fkbp4	Peptidylprolyl isomerase. (454 aa)
	LOC105920254	Peptidylprolyl isomerase. (107 aa)
	LOC105935258	Peptidylprolyl isomerase. (168 aa)
	LOC105938730	DnaJ heat shock protein family (Hsp40) member B12a. (404 aa)
	fkbp1b	Peptidylprolyl isomerase. (108 aa)
	st13	ST13 Hsp70 interacting protein. (358 aa)
	tor4a	Torsin family 4, member Aa. (437 aa)
	ENSFHEP00000032891	Uncharacterized protein. (288 aa)
	fkbp3	Peptidylprolyl isomerase. (221 aa)
	LOC105928008	Heat shock protein, alpha-crystallin-related, 1; Belongs to the small heat shock protein (HSP20) family. (202 aa)
	ENSFHEP00000031265	DUF384 domain-containing protein. (143 aa)
	LOC105915833	DnaJ (Hsp40) homolog, subfamily C, member 5ab. (86 aa)
	ENSFHEP00000030413	J domain-containing protein. (77 aa)
	LOC105932037	DnaJ heat shock protein family (Hsp40) member B1a. (332 aa)
	LOC105937875	Peptidylprolyl isomerase. (108 aa)
	LOC105933245	Peptidylprolyl isomerase. (469 aa)
	LOC105915295	Heat shock protein, alpha-crystallin-related, b15; Belongs to the small heat shock protein (HSP20) family. (203 aa)
	dnajc7	DnaJ (Hsp40) homolog, subfamily C, member 7. (474 aa)
	dnajb12	DnaJ heat shock protein family (Hsp40) member B12b. (367 aa)
	hspb6	Heat shock protein, alpha-crystallin-related, b6; Belongs to the small heat shock protein (HSP20) family. (139 aa)
	ENSFHEP00000027142	DnaJ (Hsp40) homolog, subfamily C, member 5 gamma a. (190 aa)
	ENSFHEP00000026485	Uncharacterized protein. (90 aa)
	LOC105930035	Zgc:122979. (374 aa)
	hspa9	Heat shock protein 9; Belongs to the heat shock protein 70 family. (734 aa)
	unc45b	Unc-45 myosin chaperone B. (930 aa)
	LOC105931799	Si:ch211-199o1.2; Belongs to the heat shock protein 70 family. (638 aa)
	tor3a	Torsin family 3, member A. (367 aa)
	pex19	Peroxisomal biogenesis factor 19. (237 aa)
	LOC105917874	Stromal cell-derived factor 2. (226 aa)
	dnajb13	DnaJ heat shock protein family (Hsp40) member B13. (315 aa)
	hspa13	Heat shock protein 70 family, member 13. (442 aa)
	LOC105926142	Uncharacterized protein. (121 aa)
	LOC105920913	Heat shock cognate 71 kDa protein; Belongs to the heat shock protein 70 family. (649 aa)
	cct5	Chaperonin containing TCP1, subunit 5 (epsilon). (554 aa)
	ppid	Peptidylprolyl isomerase D. (371 aa)
	LOC105920339	Clusterin; Belongs to the clusterin family. (464 aa)
	LOC105928007	Heat shock protein, alpha-crystallin-related, 1; Belongs to the small heat shock protein (HSP20) family. (202 aa)
	ppib	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (216 aa)
	cct3	T-complex protein 1 subunit gamma. (540 aa)
	LOC105919846	Crystallin, alpha B, a; Belongs to the small heat shock protein (HSP20) family. (225 aa)
	dnajc18	DnaJ (Hsp40) homolog, subfamily C, member 18. (390 aa)
	dnajb6	DnaJ heat shock protein family (Hsp40) member B6b. (362 aa)
	clu	Clusterin; Belongs to the clusterin family. (460 aa)
	LOC105923971	Heat shock 10 protein 1; Belongs to the GroES chaperonin family. (115 aa)
	cct2	Chaperonin containing TCP1, subunit 2 (beta). (488 aa)
	ENSFHEP00000011031	Clusterin; Belongs to the clusterin family. (412 aa)
	dnajb5	J domain-containing protein. (369 aa)
	dnajb1	DnaJ heat shock protein family (Hsp40) member B1b. (363 aa)
	HSPA8	Heat shock protein 8; Belongs to the heat shock protein 70 family. (646 aa)
	fkbp7	Peptidylprolyl isomerase. (223 aa)
	hspa14	Heat shock protein 14; Belongs to the heat shock protein 70 family. (510 aa)
	DNAJC7	DnaJ heat shock protein family (Hsp40) member C7. (497 aa)
	ENSFHEP00000008206	TPR_REGION domain-containing protein. (219 aa)
	fkbp11	Peptidylprolyl isomerase. (187 aa)
	dnajb2	J domain-containing protein. (395 aa)
	ENSFHEP00000006489	J domain-containing protein. (101 aa)
	dnajb14	DnaJ heat shock protein family (Hsp40) member B14. (377 aa)
	ENSFHEP00000005340	Torsin family 1. (152 aa)
	LOC105932312	Torsin family 1. (399 aa)
	ENSFHEP00000005248	Uncharacterized protein. (125 aa)
	LOC105939722	Uncharacterized protein; Belongs to the heat shock protein 70 family. (649 aa)
	LOC105932230	DnaJ heat shock protein family (Hsp40) member B4. (227 aa)
	dnajc5	DnaJ (Hsp40) homolog, subfamily C, member 5aa. (199 aa)
	LOC105932959	J domain-containing protein. (206 aa)
	fkbp2	Peptidylprolyl isomerase. (138 aa)

Your Current Organism:

Fundulus heteroclitus

NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DNAJC7	ENSFHEP00000032891	ENSFHEP00000008852	ENSFHEP00000032891	DnaJ heat shock protein family (Hsp40) member C7.	Uncharacterized protein.	0.704
DNAJC7	HSPA8	ENSFHEP00000008852	ENSFHEP00000009575	DnaJ heat shock protein family (Hsp40) member C7.	Heat shock protein 8; Belongs to the heat shock protein 70 family.	0.704
DNAJC7	LOC105920913	ENSFHEP00000008852	ENSFHEP00000018421	DnaJ heat shock protein family (Hsp40) member C7.	Heat shock cognate 71 kDa protein; Belongs to the heat shock protein 70 family.	0.704
DNAJC7	LOC105923971	ENSFHEP00000008852	ENSFHEP00000012603	DnaJ heat shock protein family (Hsp40) member C7.	Heat shock 10 protein 1; Belongs to the GroES chaperonin family.	0.518
DNAJC7	LOC105931799	ENSFHEP00000008852	ENSFHEP00000023839	DnaJ heat shock protein family (Hsp40) member C7.	Si:ch211-199o1.2; Belongs to the heat shock protein 70 family.	0.704
DNAJC7	LOC105939722	ENSFHEP00000008852	ENSFHEP00000004231	DnaJ heat shock protein family (Hsp40) member C7.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.704
DNAJC7	cct2	ENSFHEP00000008852	ENSFHEP00000011967	DnaJ heat shock protein family (Hsp40) member C7.	Chaperonin containing TCP1, subunit 2 (beta).	0.459
DNAJC7	hspa13	ENSFHEP00000008852	ENSFHEP00000021445	DnaJ heat shock protein family (Hsp40) member C7.	Heat shock protein 70 family, member 13.	0.668
DNAJC7	hspa14	ENSFHEP00000008852	ENSFHEP00000009240	DnaJ heat shock protein family (Hsp40) member C7.	Heat shock protein 14; Belongs to the heat shock protein 70 family.	0.695
DNAJC7	hspa9	ENSFHEP00000008852	ENSFHEP00000024880	DnaJ heat shock protein family (Hsp40) member C7.	Heat shock protein 9; Belongs to the heat shock protein 70 family.	0.717
ENSFHEP00000027142	ENSFHEP00000032891	ENSFHEP00000027142	ENSFHEP00000032891	DnaJ (Hsp40) homolog, subfamily C, member 5 gamma a.	Uncharacterized protein.	0.725
ENSFHEP00000027142	HSPA8	ENSFHEP00000027142	ENSFHEP00000009575	DnaJ (Hsp40) homolog, subfamily C, member 5 gamma a.	Heat shock protein 8; Belongs to the heat shock protein 70 family.	0.725
ENSFHEP00000027142	LOC105920913	ENSFHEP00000027142	ENSFHEP00000018421	DnaJ (Hsp40) homolog, subfamily C, member 5 gamma a.	Heat shock cognate 71 kDa protein; Belongs to the heat shock protein 70 family.	0.725
ENSFHEP00000027142	LOC105923971	ENSFHEP00000027142	ENSFHEP00000012603	DnaJ (Hsp40) homolog, subfamily C, member 5 gamma a.	Heat shock 10 protein 1; Belongs to the GroES chaperonin family.	0.784
ENSFHEP00000027142	LOC105930035	ENSFHEP00000027142	ENSFHEP00000025170	DnaJ (Hsp40) homolog, subfamily C, member 5 gamma a.	Zgc:122979.	0.447
ENSFHEP00000027142	LOC105931799	ENSFHEP00000027142	ENSFHEP00000023839	DnaJ (Hsp40) homolog, subfamily C, member 5 gamma a.	Si:ch211-199o1.2; Belongs to the heat shock protein 70 family.	0.725
ENSFHEP00000027142	LOC105932037	ENSFHEP00000027142	ENSFHEP00000029783	DnaJ (Hsp40) homolog, subfamily C, member 5 gamma a.	DnaJ heat shock protein family (Hsp40) member B1a.	0.460
ENSFHEP00000027142	LOC105932230	ENSFHEP00000027142	ENSFHEP00000004178	DnaJ (Hsp40) homolog, subfamily C, member 5 gamma a.	DnaJ heat shock protein family (Hsp40) member B4.	0.423
ENSFHEP00000027142	LOC105938730	ENSFHEP00000027142	ENSFHEP00000034246	DnaJ (Hsp40) homolog, subfamily C, member 5 gamma a.	DnaJ heat shock protein family (Hsp40) member B12a.	0.526
ENSFHEP00000027142	LOC105939722	ENSFHEP00000027142	ENSFHEP00000004231	DnaJ (Hsp40) homolog, subfamily C, member 5 gamma a.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.725