STRINGSTRING
LOC105937694 LOC105937694 ttc3 ttc3 rnf126 rnf126 ENSFHEP00000034358 ENSFHEP00000034358 LOC105928986 LOC105928986 LOC105920264 LOC105920264 LOC105935585 LOC105935585 ENSFHEP00000000227 ENSFHEP00000000227 RNF126 RNF126 LOC105923405 LOC105923405 rnf152 rnf152 LOC105936834 LOC105936834 marchf6 marchf6 ENSFHEP00000006719 ENSFHEP00000006719 LOC105923832 LOC105923832 ENSFHEP00000007305 ENSFHEP00000007305 ENSFHEP00000007335 ENSFHEP00000007335 ENSFHEP00000007356 ENSFHEP00000007356 LOC105936749 LOC105936749 LOC105925884 LOC105925884 LOC105930552 LOC105930552 klhl2 klhl2 rnf216 rnf216 LOC105939568 LOC105939568 LOC105927587 LOC105927587 amfr amfr LOC105915319 LOC105915319 BFAR BFAR fbxo38 fbxo38 ENSFHEP00000013607 ENSFHEP00000013607 ENSFHEP00000013647 ENSFHEP00000013647 ITCH ITCH ube2g1 ube2g1 LOC105931963 LOC105931963 ENSFHEP00000016136 ENSFHEP00000016136 CUL3 CUL3 ube2e1 ube2e1 ubr5 ubr5 ube2b ube2b LOC105922219 LOC105922219 tnfaip3 tnfaip3 UBE3A UBE3A ube2h ube2h LOC105926846 LOC105926846 ENSFHEP00000018793 ENSFHEP00000018793 ube2g2 ube2g2 znrf1 znrf1 rnf115 rnf115 ENSFHEP00000020106 ENSFHEP00000020106 LOC105936446 LOC105936446 LOC105922127 LOC105922127 UBE2D1 UBE2D1 LOC105939847 LOC105939847 LOC105928998 LOC105928998 ube2r2 ube2r2 rnf8 rnf8 hace1 hace1 LOC105928804 LOC105928804 LOC105934572 LOC105934572 RNF146 RNF146 trim32 trim32 LOC105940282 LOC105940282 ube2c ube2c LOC105939633 LOC105939633 ube2k ube2k LOC105936748 LOC105936748 rnf4 rnf4 LOC105925373 LOC105925373 LOC105935163 LOC105935163 ENSFHEP00000030519 ENSFHEP00000030519 ube3c ube3c LOC105929182 LOC105929182 LOC105934920 LOC105934920 ube2a ube2a arih2 arih2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC105937694UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (257 aa)
ttc3Tetratricopeptide repeat domain 3. (1432 aa)
rnf126RING-type domain-containing protein. (323 aa)
ENSFHEP00000034358RING-type domain-containing protein. (201 aa)
LOC105928986Zgc:66440. (397 aa)
LOC105920264Zgc:66427. (263 aa)
LOC105935585Ubiquitin-conjugating enzyme E2 H; Belongs to the ubiquitin-conjugating enzyme family. (183 aa)
ENSFHEP00000000227Cullin 1b; Belongs to the cullin family. (471 aa)
RNF126E3 ubiquitin-protein ligase RNF126. (313 aa)
LOC105923405CULLIN_2 domain-containing protein; Belongs to the cullin family. (528 aa)
rnf152Ring finger protein 152. (173 aa)
LOC105936834Cell division cycle 34 homolog (S. cerevisiae) a; Belongs to the ubiquitin-conjugating enzyme family. (274 aa)
marchf6Membrane-associated ring finger (C3HC4) 6. (870 aa)
ENSFHEP00000006719Ubiquitin-like domain-containing protein. (148 aa)
LOC105923832RING-type domain-containing protein. (651 aa)
ENSFHEP00000007305Kelch-like family member 3. (359 aa)
ENSFHEP00000007335Uncharacterized protein. (65 aa)
ENSFHEP00000007356Uncharacterized protein. (63 aa)
LOC105936749UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (194 aa)
LOC105925884E3 ubiquitin-protein ligase. (880 aa)
LOC105930552Ring finger protein 146. (375 aa)
klhl2Kelch-like family member 2. (605 aa)
rnf216Ring finger protein 216. (549 aa)
LOC105939568Ubiquitin-conjugating enzyme E2 D4; Belongs to the ubiquitin-conjugating enzyme family. (148 aa)
LOC105927587Kelch repeat and BTB (POZ) domain containing 7. (631 aa)
amfrAutocrine motility factor receptor b. (630 aa)
LOC105915319Ring finger protein 34b. (405 aa)
BFARBifunctional apoptosis regulator. (457 aa)
fbxo38F-box protein 38. (1176 aa)
ENSFHEP00000013607Uncharacterized protein. (117 aa)
ENSFHEP00000013647Uncharacterized protein. (100 aa)
ITCHItchy E3 ubiquitin protein ligase. (445 aa)
ube2g1Ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family. (170 aa)
LOC105931963Zinc and ring finger 2a. (171 aa)
ENSFHEP00000016136Uncharacterized protein. (101 aa)
CUL3Cullin 3; Belongs to the cullin family. (766 aa)
ube2e1Ubiquitin-conjugating enzyme E2E 1; Belongs to the ubiquitin-conjugating enzyme family. (198 aa)
ubr5Ubiquitin protein ligase E3 component n-recognin 5. (2535 aa)
ube2bUbiquitin conjugating enzyme E2 B; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
LOC105922219RBR-type E3 ubiquitin transferase. (169 aa)
tnfaip3Tumor necrosis factor, alpha-induced protein 3. (851 aa)
UBE3AUbiquitin protein ligase E3A. (912 aa)
ube2hUbiquitin-conjugating enzyme E2H (UBC8 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family. (183 aa)
LOC105926846Ubiquitin-conjugating enzyme E2D 4 (putative); Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
ENSFHEP00000018793Uncharacterized protein. (82 aa)
ube2g2Ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family. (165 aa)
znrf1Zinc and ring finger 1. (217 aa)
rnf115Ring finger protein 115. (233 aa)
ENSFHEP00000020106DTC domain-containing protein. (522 aa)
LOC105936446E3 ubiquitin-protein ligase MARCH6. (931 aa)
LOC105922127Uncharacterized protein. (321 aa)
UBE2D1Ubiquitin-conjugating enzyme E2D 1a; Belongs to the ubiquitin-conjugating enzyme family. (149 aa)
LOC105939847Ubiquitin conjugating enzyme E2 K; Belongs to the ubiquitin-conjugating enzyme family. (200 aa)
LOC105928998RING-type domain-containing protein. (192 aa)
ube2r2Ubiquitin-conjugating enzyme E2R 2; Belongs to the ubiquitin-conjugating enzyme family. (294 aa)
rnf8E3 ubiquitin-protein ligase RNF8; E3 ubiquitin-protein ligase that plays a key role in DNA damage signaling via 2 distinct roles: by mediating the 'Lys-63'-linked ubiquitination of histones H2A and H2AX and promoting the recruitment of DNA repair proteins at double-strand breaks (DSBs) sites, and by catalyzing 'Lys-48'-linked ubiquitination to remove target proteins from DNA damage sites. Following DNA DSBs, it is recruited to the sites of damage by ATM-phosphorylated MDC1 and catalyzes the 'Lys-63'-linked ubiquitination of histones H2A and H2AX, thereby promoting the formation of TP53 [...] (513 aa)
hace1HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1. (947 aa)
LOC105928804Ring finger protein 34a. (380 aa)
LOC105934572Cell division cycle 34 homolog (S. cerevisiae) b; Belongs to the ubiquitin-conjugating enzyme family. (238 aa)
RNF146Ring finger protein 146. (360 aa)
trim32Tripartite motif containing 32. (680 aa)
LOC105940282UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (169 aa)
ube2cUbiquitin-conjugating enzyme E2C; Belongs to the ubiquitin-conjugating enzyme family. (174 aa)
LOC105939633E3 ubiquitin-protein ligase ZNRF2. (228 aa)
ube2kUbiquitin-conjugating enzyme E2Kb (UBC1 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family. (200 aa)
LOC105936748Ubiquitin-conjugating enzyme E2E 2; Belongs to the ubiquitin-conjugating enzyme family. (201 aa)
rnf4RING-type domain-containing protein. (185 aa)
LOC105925373Ubiquitin protein ligase E3A. (823 aa)
LOC105935163Si:ch211-81a5.1. (296 aa)
ENSFHEP00000030519RING-type domain-containing protein. (179 aa)
ube3cUbiquitin protein ligase E3C. (1080 aa)
LOC105929182Ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
LOC105934920Ubiquitin conjugating enzyme E2 A, like; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
ube2aUbiquitin-conjugating enzyme E2A (RAD6 homolog); Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
arih2RBR-type E3 ubiquitin transferase. (293 aa)
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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