17 items (Fundulus heteroclitus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	wdr24	WD repeat domain 24. (706 aa)
	wac	WW domain containing adaptor with coiled-coil a. (541 aa)
	lamtor5	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5. (94 aa)
	GPR137B	G protein-coupled receptor 137B. (386 aa)
	LOC105919479	G protein-coupled receptor 137. (378 aa)
	mios	Missing oocyte, meiosis regulator, homolog (Drosophila). (855 aa)
	ENSFHEP00000008829	Uncharacterized protein. (252 aa)
	lars1	Leucyl-tRNA synthetase b; Belongs to the class-I aminoacyl-tRNA synthetase family. (1068 aa)
	sec13	SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. (320 aa)
	seh1l	SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family. (383 aa)
	LOC105930296	WW domain-containing protein. (529 aa)
	LOC105927798	Ras-related GTP binding A. (315 aa)
	clec16a	C-type lectin domain containing 16A. (935 aa)
	LOC105916159	G protein-coupled receptor 137c. (449 aa)
	wdr59	WD repeat domain 59. (941 aa)
	klhl22	Kelch-like family member 22. (640 aa)
	flcn	Folliculin. (564 aa)

Your Current Organism:

Fundulus heteroclitus

NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC105927798	flcn	ENSFHEP00000022033	ENSFHEP00000030845	Ras-related GTP binding A.	Folliculin.	0.997
LOC105927798	lamtor5	ENSFHEP00000022033	ENSFHEP00000004077	Ras-related GTP binding A.	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5.	0.998
LOC105927798	lars1	ENSFHEP00000022033	ENSFHEP00000008938	Ras-related GTP binding A.	Leucyl-tRNA synthetase b; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.713
LOC105927798	mios	ENSFHEP00000022033	ENSFHEP00000008653	Ras-related GTP binding A.	Missing oocyte, meiosis regulator, homolog (Drosophila).	0.989
LOC105927798	sec13	ENSFHEP00000022033	ENSFHEP00000014441	Ras-related GTP binding A.	SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.	0.884
LOC105927798	seh1l	ENSFHEP00000022033	ENSFHEP00000017046	Ras-related GTP binding A.	SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family.	0.871
LOC105927798	wdr24	ENSFHEP00000022033	ENSFHEP00000000983	Ras-related GTP binding A.	WD repeat domain 24.	0.990
LOC105927798	wdr59	ENSFHEP00000022033	ENSFHEP00000025365	Ras-related GTP binding A.	WD repeat domain 59.	0.872
flcn	LOC105927798	ENSFHEP00000030845	ENSFHEP00000022033	Folliculin.	Ras-related GTP binding A.	0.997
flcn	lamtor5	ENSFHEP00000030845	ENSFHEP00000004077	Folliculin.	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5.	0.900
flcn	lars1	ENSFHEP00000030845	ENSFHEP00000008938	Folliculin.	Leucyl-tRNA synthetase b; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.518
flcn	mios	ENSFHEP00000030845	ENSFHEP00000008653	Folliculin.	Missing oocyte, meiosis regulator, homolog (Drosophila).	0.620
flcn	sec13	ENSFHEP00000030845	ENSFHEP00000014441	Folliculin.	SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.	0.753
flcn	wdr24	ENSFHEP00000030845	ENSFHEP00000000983	Folliculin.	WD repeat domain 24.	0.607
flcn	wdr59	ENSFHEP00000030845	ENSFHEP00000025365	Folliculin.	WD repeat domain 59.	0.608
lamtor5	LOC105927798	ENSFHEP00000004077	ENSFHEP00000022033	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5.	Ras-related GTP binding A.	0.998
lamtor5	flcn	ENSFHEP00000004077	ENSFHEP00000030845	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5.	Folliculin.	0.900
lamtor5	mios	ENSFHEP00000004077	ENSFHEP00000008653	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5.	Missing oocyte, meiosis regulator, homolog (Drosophila).	0.795
lamtor5	sec13	ENSFHEP00000004077	ENSFHEP00000014441	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5.	SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.	0.741
lamtor5	seh1l	ENSFHEP00000004077	ENSFHEP00000017046	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5.	SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family.	0.687