49 items (Fundulus heteroclitus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ssr4	Signal sequence receptor, delta. (167 aa)
	ccdc47	Coiled-coil domain containing 47. (489 aa)
	ENSFHEP00000000251	RAN guanine nucleotide release factor. (187 aa)
	epm2a	EPM2A glucan phosphatase, laforin. (316 aa)
	zc3h12a	Zinc finger CCCH-type containing 12A. (618 aa)
	LOC105921986	Si:dkey-206d17.12. (588 aa)
	LOC105926864	Olfactomedin 3-like protein. (410 aa)
	sec61g	SEC61 translocon gamma subunit. (68 aa)
	SEC61A1	Plug_translocon domain-containing protein. (476 aa)
	rps28	Ribosomal protein S28. (69 aa)
	LOC105923978	Zgc:153704; Belongs to the calycin superfamily. Lipocalin family. (191 aa)
	rpl27	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (113 aa)
	LOC105927183	Protein transport protein Sec61 subunit alpha. (476 aa)
	maco1	Macoilin 1b. (693 aa)
	sec63	SEC63 homolog, protein translocation regulator. (759 aa)
	rps26	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (120 aa)
	LOC105929904	Myosin heavy chain 9; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1760 aa)
	ENSFHEP00000008600	Uncharacterized protein. (105 aa)
	LOC105932766	Phosphoinositide phospholipase C. (1221 aa)
	LOC105923102	Uncharacterized protein. (214 aa)
	lrpap1	Low density lipoprotein receptor-related protein associated protein 1. (347 aa)
	LOC105925271	SUN domain-containing protein. (1302 aa)
	rps15a	Ribosomal protein S15a; Belongs to the universal ribosomal protein uS8 family. (153 aa)
	ENSFHEP00000014763	Fukutin related protein. (533 aa)
	ENSFHEP00000014959	Lecithin retinol acyltransferase b, tandem duplicate 1. (201 aa)
	LOC110366687	Bulb-type lectin domain-containing protein. (116 aa)
	srpra	SRP receptor subunit alpha. (651 aa)
	LOC105930754	Si:dkey-12h9.6. (526 aa)
	LOC105929748	Olfactomedin-like domain-containing protein. (400 aa)
	LOC105928460	Myosin, heavy chain 14, non-muscle; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1929 aa)
	myoc	Myocilin. (482 aa)
	ENSFHEP00000021330	Uncharacterized protein. (652 aa)
	tmem97	Transmembrane protein 97; Intracellular orphan receptor that binds numerous drugs and which is highly expressed in various proliferating cells. Corresponds to the sigma-2 receptor, which is thought to play important role in regulating cell survival, morphology and differentiation. May play a role as a regulator of cellular cholesterol homeostasis. May function as sterol isomerase. May alter the activity of some cytochrome P450 proteins. (177 aa)
	LOC105939772	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1951 aa)
	LOC105927236	Prostaglandin D2 synthase b, tandem duplicate 1; Belongs to the calycin superfamily. Lipocalin family. (189 aa)
	ckap4	Uncharacterized protein. (531 aa)
	rpl4	Ribosomal protein L4. (368 aa)
	srprb	SRP receptor subunit beta. (266 aa)
	ENSFHEP00000025750	Ribosomal_L18e/L15P domain-containing protein. (69 aa)
	LOC105932103	Lipocalin 15; Belongs to the calycin superfamily. Lipocalin family. (182 aa)
	ENSFHEP00000028129	Hypocretin (orexin) neuropeptide precursor. (106 aa)
	sec61b	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. (97 aa)
	LOC105925182	Olfactomedin-like domain-containing protein. (471 aa)
	rps21	Ribosomal protein S21. (137 aa)
	LOC105938893	ADP-ribosylation factor-like 6 interacting protein 1. (203 aa)
	RPS29	Ribosomal protein S29. (66 aa)
	LOC105931968	Macoilin 1a. (671 aa)
	LOC105922971	Olfactomedin 3a. (417 aa)
	rpl18	Ribosomal protein L18. (190 aa)

Your Current Organism:

Fundulus heteroclitus

NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSFHEP00000008600	LOC105927183	ENSFHEP00000008600	ENSFHEP00000005878	Uncharacterized protein.	Protein transport protein Sec61 subunit alpha.	0.967
ENSFHEP00000008600	SEC61A1	ENSFHEP00000008600	ENSFHEP00000004874	Uncharacterized protein.	Plug_translocon domain-containing protein.	0.967
ENSFHEP00000008600	sec61b	ENSFHEP00000008600	ENSFHEP00000029705	Uncharacterized protein.	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	0.975
ENSFHEP00000008600	sec61g	ENSFHEP00000008600	ENSFHEP00000002848	Uncharacterized protein.	SEC61 translocon gamma subunit.	0.990
ENSFHEP00000008600	sec63	ENSFHEP00000008600	ENSFHEP00000006965	Uncharacterized protein.	SEC63 homolog, protein translocation regulator.	0.999
ENSFHEP00000008600	srpra	ENSFHEP00000008600	ENSFHEP00000015349	Uncharacterized protein.	SRP receptor subunit alpha.	0.644
ENSFHEP00000008600	srprb	ENSFHEP00000008600	ENSFHEP00000024435	Uncharacterized protein.	SRP receptor subunit beta.	0.555
ENSFHEP00000021330	ccdc47	ENSFHEP00000021330	ENSFHEP00000000196	Uncharacterized protein.	Coiled-coil domain containing 47.	0.416
ENSFHEP00000025750	LOC105923102	ENSFHEP00000025750	ENSFHEP00000012569	Ribosomal_L18e/L15P domain-containing protein.	Uncharacterized protein.	0.964
ENSFHEP00000025750	LOC105927183	ENSFHEP00000025750	ENSFHEP00000005878	Ribosomal_L18e/L15P domain-containing protein.	Protein transport protein Sec61 subunit alpha.	0.746
ENSFHEP00000025750	LOC105938893	ENSFHEP00000025750	ENSFHEP00000030578	Ribosomal_L18e/L15P domain-containing protein.	ADP-ribosylation factor-like 6 interacting protein 1.	0.964
ENSFHEP00000025750	RPS29	ENSFHEP00000025750	ENSFHEP00000032120	Ribosomal_L18e/L15P domain-containing protein.	Ribosomal protein S29.	0.996
ENSFHEP00000025750	SEC61A1	ENSFHEP00000025750	ENSFHEP00000004874	Ribosomal_L18e/L15P domain-containing protein.	Plug_translocon domain-containing protein.	0.746
ENSFHEP00000025750	ccdc47	ENSFHEP00000025750	ENSFHEP00000000196	Ribosomal_L18e/L15P domain-containing protein.	Coiled-coil domain containing 47.	0.744
ENSFHEP00000025750	rpl27	ENSFHEP00000025750	ENSFHEP00000005448	Ribosomal_L18e/L15P domain-containing protein.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.998
ENSFHEP00000025750	rpl4	ENSFHEP00000025750	ENSFHEP00000024088	Ribosomal_L18e/L15P domain-containing protein.	Ribosomal protein L4.	0.998
ENSFHEP00000025750	rps15a	ENSFHEP00000025750	ENSFHEP00000014596	Ribosomal_L18e/L15P domain-containing protein.	Ribosomal protein S15a; Belongs to the universal ribosomal protein uS8 family.	0.964
ENSFHEP00000025750	rps21	ENSFHEP00000025750	ENSFHEP00000030534	Ribosomal_L18e/L15P domain-containing protein.	Ribosomal protein S21.	0.996
ENSFHEP00000025750	rps26	ENSFHEP00000025750	ENSFHEP00000007065	Ribosomal_L18e/L15P domain-containing protein.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.996
ENSFHEP00000025750	rps28	ENSFHEP00000025750	ENSFHEP00000004933	Ribosomal_L18e/L15P domain-containing protein.	Ribosomal protein S28.	0.997