56 items (Fundulus heteroclitus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	mrps11	Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family. (195 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	mrps10	Mitochondrial ribosomal protein S10. (208 aa)
	mrps35	Mitochondrial ribosomal protein S35. (343 aa)
	mrps17	Mitochondrial ribosomal protein S17. (145 aa)
	dhx29	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily. (1389 aa)
	mrps14	Mitochondrial ribosomal protein S14. (149 aa)
	rps16	Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (146 aa)
	dap3	Death associated protein 3. (395 aa)
	rps6	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
	LOC105928521	40S ribosomal protein S27. (133 aa)
	rps13	Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (108 aa)
	rps7	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (170 aa)
	RPS20	Ribosomal protein S20. (119 aa)
	rps23	Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (147 aa)
	RPS29	Ribosomal protein S29. (66 aa)
	mrps18b	Mitochondrial ribosomal protein S18B. (247 aa)
	mcts1	Malignant T-cell-amplified sequence. (181 aa)
	LOC105916387	40S ribosomal S17-like protein. (134 aa)
	mrps33	Mitochondrial ribosomal protein S33. (106 aa)
	mrps18a	Mitochondrial ribosomal protein S18A. (208 aa)
	mrps9	Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. (380 aa)
	rps18	Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (152 aa)
	mrps5	Mitochondrial ribosomal protein S5. (359 aa)
	rps15	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (145 aa)
	mrps12	Mitochondrial ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family. (142 aa)
	LOC105936825	40S ribosomal protein S27. (138 aa)
	mrps31	Mitochondrial ribosomal protein S31. (388 aa)
	mrps7	Mitochondrial ribosomal protein S7. (229 aa)
	rps2	Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (279 aa)
	ppp1r26	Uncharacterized protein. (1111 aa)
	mrps15	Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family. (259 aa)
	mrps16	Mitochondrial ribosomal protein S16. (137 aa)
	ENSFHEP00000020242	Uncharacterized protein. (78 aa)
	rps24	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (139 aa)
	mrps22	Mitochondrial ribosomal protein S22. (338 aa)
	ENSFHEP00000017354	Mitochondrial ribosomal protein S27. (178 aa)
	fau	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (133 aa)
	LOC105924827	28S ribosomal protein S18c, mitochondrial-like. (128 aa)
	rps17	Uncharacterized protein. (135 aa)
	ENSFHEP00000015303	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (110 aa)
	LOC105918660	Mitochondrial ribosomal protein S18C. (135 aa)
	rps25	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (123 aa)
	mrps21	Mitochondrial ribosomal protein S21. (87 aa)
	ENSFHEP00000009411	Uncharacterized protein. (139 aa)
	rpsa	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (307 aa)
	rps5	Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (203 aa)
	rps3a	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (266 aa)
	rps26	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (120 aa)
	rps28	Ribosomal protein S28. (69 aa)
	ENSFHEP00000004789	Ribosomal_S17_N domain-containing protein. (75 aa)
	mrps26	Mitochondrial ribosomal protein S26. (227 aa)
	ENSFHEP00000004492	Mitochondrial ribosomal protein S6. (122 aa)
	mrps25	Mitochondrial ribosomal protein S25. (176 aa)
	mrps24	Mitochondrial ribosomal protein S24. (171 aa)
	ENSFHEP00000001155	Mitochondrial ribosomal protein S2. (242 aa)

Your Current Organism:

Fundulus heteroclitus

NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSFHEP00000001155	ENSFHEP00000004492	ENSFHEP00000001155	ENSFHEP00000004492	Mitochondrial ribosomal protein S2.	Mitochondrial ribosomal protein S6.	0.998
ENSFHEP00000001155	ENSFHEP00000004789	ENSFHEP00000001155	ENSFHEP00000004789	Mitochondrial ribosomal protein S2.	Ribosomal_S17_N domain-containing protein.	0.996
ENSFHEP00000001155	ENSFHEP00000009411	ENSFHEP00000001155	ENSFHEP00000009411	Mitochondrial ribosomal protein S2.	Uncharacterized protein.	0.988
ENSFHEP00000001155	ENSFHEP00000015303	ENSFHEP00000001155	ENSFHEP00000015303	Mitochondrial ribosomal protein S2.	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.	0.981
ENSFHEP00000001155	ENSFHEP00000017354	ENSFHEP00000001155	ENSFHEP00000017354	Mitochondrial ribosomal protein S2.	Mitochondrial ribosomal protein S27.	0.975
ENSFHEP00000001155	ENSFHEP00000020242	ENSFHEP00000001155	ENSFHEP00000020242	Mitochondrial ribosomal protein S2.	Uncharacterized protein.	0.988
ENSFHEP00000001155	LOC105916387	ENSFHEP00000001155	ENSFHEP00000029886	Mitochondrial ribosomal protein S2.	40S ribosomal S17-like protein.	0.995
ENSFHEP00000001155	LOC105918660	ENSFHEP00000001155	ENSFHEP00000014024	Mitochondrial ribosomal protein S2.	Mitochondrial ribosomal protein S18C.	0.962
ENSFHEP00000001155	LOC105924827	ENSFHEP00000001155	ENSFHEP00000017039	Mitochondrial ribosomal protein S2.	28S ribosomal protein S18c, mitochondrial-like.	0.962
ENSFHEP00000001155	LOC105928521	ENSFHEP00000001155	ENSFHEP00000033815	Mitochondrial ribosomal protein S2.	40S ribosomal protein S27.	0.933
ENSFHEP00000001155	LOC105936825	ENSFHEP00000001155	ENSFHEP00000023336	Mitochondrial ribosomal protein S2.	40S ribosomal protein S27.	0.933
ENSFHEP00000001155	RPS20	ENSFHEP00000001155	ENSFHEP00000032677	Mitochondrial ribosomal protein S2.	Ribosomal protein S20.	0.990
ENSFHEP00000001155	RPS29	ENSFHEP00000001155	ENSFHEP00000032120	Mitochondrial ribosomal protein S2.	Ribosomal protein S29.	0.959
ENSFHEP00000001155	dap3	ENSFHEP00000001155	ENSFHEP00000033980	Mitochondrial ribosomal protein S2.	Death associated protein 3.	0.990
ENSFHEP00000001155	fau	ENSFHEP00000001155	ENSFHEP00000017101	Mitochondrial ribosomal protein S2.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
ENSFHEP00000001155	mcts1	ENSFHEP00000001155	ENSFHEP00000031632	Mitochondrial ribosomal protein S2.	Malignant T-cell-amplified sequence.	0.472
ENSFHEP00000001155	mrps10	ENSFHEP00000001155	ENSFHEP00000000145	Mitochondrial ribosomal protein S2.	Mitochondrial ribosomal protein S10.	0.997
ENSFHEP00000001155	mrps11	ENSFHEP00000001155	ENSFHEP00000000592	Mitochondrial ribosomal protein S2.	Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.	0.997
ENSFHEP00000001155	mrps12	ENSFHEP00000001155	ENSFHEP00000023517	Mitochondrial ribosomal protein S2.	Mitochondrial ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.	0.997
ENSFHEP00000001155	mrps14	ENSFHEP00000001155	ENSFHEP00000034458	Mitochondrial ribosomal protein S2.	Mitochondrial ribosomal protein S14.	0.988