57 items (Fundulus heteroclitus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC105935996	Uncharacterized protein. (185 aa)
	anxa4	Annexin. (356 aa)
	ybx1	Y box binding protein 1. (303 aa)
	LOC105926030	RAB7a, member RAS oncogene family. (234 aa)
	GPRC5D	G protein-coupled receptor class C group 5 member D. (420 aa)
	LOC105938580	L-lactate dehydrogenase C chain. (335 aa)
	RAB7A	RAB7A, member RAS oncogene family. (207 aa)
	egf	Epidermal growth factor. (999 aa)
	pdcd6ip	Programmed cell death 6 interacting protein. (880 aa)
	LOC105937146	Tetraspanin. (239 aa)
	LOC105927074	Metalloendopeptidase. (274 aa)
	LOC105931260	Annexin. (317 aa)
	LOC105920559	Heat shock protein 4b. (785 aa)
	tmem98	Transmembrane protein 98. (224 aa)
	guk1	Guanylate kinase 1a. (211 aa)
	LOC105918759	Betaine-homocysteine methyltransferase; Involved in the regulation of homocysteine metabolism. (400 aa)
	LOC105932087	Uncharacterized protein. (509 aa)
	rack1	Receptor for activated C kinase 1. (317 aa)
	LOC105922486	Metalloendopeptidase. (240 aa)
	LOC105922485	Metalloendopeptidase. (250 aa)
	LOC105918704	Ras-related protein Rap-1A. (184 aa)
	LOC105929819	L-lactate dehydrogenase B chain. (334 aa)
	g6pd	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. (513 aa)
	rbmx	RNA binding motif protein X-linked. (385 aa)
	nsun2	NOP2/Sun RNA methyltransferase 2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (764 aa)
	ENSFHEP00000016739	Uncharacterized protein. (80 aa)
	LOC105938865	Metalloendopeptidase. (249 aa)
	LOC105938866	Metalloendopeptidase. (262 aa)
	acy1	Aminoacylase 1. (225 aa)
	ENSFHEP00000018281	Uncharacterized protein. (127 aa)
	LOC105916250	Metalloendopeptidase. (284 aa)
	LOC105916249	Metalloendopeptidase. (289 aa)
	LOC105916248	Metalloendopeptidase. (289 aa)
	LOC105931403	Betaine--homocysteine S-methyltransferase 1; Involved in the regulation of homocysteine metabolism. (401 aa)
	LOC105925575	Mammalian ependymin-related protein 1. (213 aa)
	naglu	N-acetylglucosaminidase, alpha. (783 aa)
	LOC105933960	Tetraspanin. (229 aa)
	LOC105935681	Heat shock protein 4a. (838 aa)
	mmp9	Matrix metalloproteinase-9. (685 aa)
	LOC105935262	RAP1A, member of RAS oncogene family a. (185 aa)
	LOC105930597	Heterogeneous nuclear ribonucleoprotein A/B. (314 aa)
	LOC105936784	Guanylate kinase 1b. (159 aa)
	LOC105920059	G protein-coupled receptor, class C, group 5, member Bb. (411 aa)
	galk2	Galactokinase 2. (458 aa)
	ENSFHEP00000026813	GalKase_gal_bdg domain-containing protein. (54 aa)
	ENSFHEP00000027585	G protein-coupled receptor, class C, group 5, member C. (350 aa)
	ENSFHEP00000028480	G_PROTEIN_RECEP_F3_4 domain-containing protein. (419 aa)
	LOC105917904	Heterogeneous nuclear ribonucleoprotein A/Ba. (328 aa)
	gars1	Glycyl-tRNA synthetase. (786 aa)
	LOC105922484	Metalloendopeptidase. (252 aa)
	LOC105928083	ZnMc domain-containing protein. (436 aa)
	gprc5b	G protein-coupled receptor, class C, group 5, member Ba. (397 aa)
	LOC105929827	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. (470 aa)
	LOC105931909	Annexin. (321 aa)
	plaa	Phospholipase A2-activating protein. (655 aa)
	LOC105931408	Betaine--homocysteine S-methyltransferase 1; Involved in the regulation of homocysteine metabolism. (397 aa)
	LOC105928953	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. (508 aa)

Your Current Organism:

Fundulus heteroclitus

NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC105917904	LOC105920559	ENSFHEP00000028768	ENSFHEP00000009847	Heterogeneous nuclear ribonucleoprotein A/Ba.	Heat shock protein 4b.	0.429
LOC105917904	LOC105935681	ENSFHEP00000028768	ENSFHEP00000023515	Heterogeneous nuclear ribonucleoprotein A/Ba.	Heat shock protein 4a.	0.429
LOC105917904	rack1	ENSFHEP00000028768	ENSFHEP00000011700	Heterogeneous nuclear ribonucleoprotein A/Ba.	Receptor for activated C kinase 1.	0.444
LOC105917904	rbmx	ENSFHEP00000028768	ENSFHEP00000015136	Heterogeneous nuclear ribonucleoprotein A/Ba.	RNA binding motif protein X-linked.	0.692
LOC105917904	ybx1	ENSFHEP00000028768	ENSFHEP00000001325	Heterogeneous nuclear ribonucleoprotein A/Ba.	Y box binding protein 1.	0.517
LOC105918704	LOC105929827	ENSFHEP00000012353	ENSFHEP00000029837	Ras-related protein Rap-1A.	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	0.414
LOC105918704	LOC105935262	ENSFHEP00000012353	ENSFHEP00000024043	Ras-related protein Rap-1A.	RAP1A, member of RAS oncogene family a.	0.947
LOC105918704	LOC105935996	ENSFHEP00000012353	ENSFHEP00000030994	Ras-related protein Rap-1A.	Uncharacterized protein.	0.947
LOC105918704	egf	ENSFHEP00000012353	ENSFHEP00000006835	Ras-related protein Rap-1A.	Epidermal growth factor.	0.427
LOC105918759	LOC105931403	ENSFHEP00000010925	ENSFHEP00000019407	Betaine-homocysteine methyltransferase; Involved in the regulation of homocysteine metabolism.	Betaine--homocysteine S-methyltransferase 1; Involved in the regulation of homocysteine metabolism.	0.902
LOC105918759	LOC105931408	ENSFHEP00000010925	ENSFHEP00000033896	Betaine-homocysteine methyltransferase; Involved in the regulation of homocysteine metabolism.	Betaine--homocysteine S-methyltransferase 1; Involved in the regulation of homocysteine metabolism.	0.902
LOC105920559	LOC105917904	ENSFHEP00000009847	ENSFHEP00000028768	Heat shock protein 4b.	Heterogeneous nuclear ribonucleoprotein A/Ba.	0.429
LOC105920559	LOC105930597	ENSFHEP00000009847	ENSFHEP00000024227	Heat shock protein 4b.	Heterogeneous nuclear ribonucleoprotein A/B.	0.429
LOC105920559	LOC105935681	ENSFHEP00000009847	ENSFHEP00000023515	Heat shock protein 4b.	Heat shock protein 4a.	0.953
LOC105920559	rack1	ENSFHEP00000009847	ENSFHEP00000011700	Heat shock protein 4b.	Receptor for activated C kinase 1.	0.559
LOC105926030	LOC105929827	ENSFHEP00000004649	ENSFHEP00000029837	RAB7a, member RAS oncogene family.	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	0.758
LOC105928083	mmp9	ENSFHEP00000029147	ENSFHEP00000023738	ZnMc domain-containing protein.	Matrix metalloproteinase-9.	0.769
LOC105928953	LOC105929819	ENSFHEP00000035076	ENSFHEP00000012921	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis.	L-lactate dehydrogenase B chain.	0.946
LOC105928953	LOC105938580	ENSFHEP00000035076	ENSFHEP00000005780	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis.	L-lactate dehydrogenase C chain.	0.946
LOC105928953	g6pd	ENSFHEP00000035076	ENSFHEP00000013501	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis.	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis.	0.947