6 items (Fundulus heteroclitus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	depdc5	DEP domain containing 5. (883 aa)
	nprl2	NPR2 like, GATOR1 complex subunit. (274 aa)
	ENSFHEP00000017412	Uncharacterized protein. (55 aa)
	ENSFHEP00000017385	Uncharacterized protein. (57 aa)
	mpg	N-methylpurine DNA glycosylase. (290 aa)
	nprl3	Nitrogen permease regulator 3-like protein. (599 aa)

Your Current Organism:

Fundulus heteroclitus

NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSFHEP00000017385	depdc5	ENSFHEP00000017385	ENSFHEP00000005599	Uncharacterized protein.	DEP domain containing 5.	0.996
ENSFHEP00000017385	nprl3	ENSFHEP00000017385	ENSFHEP00000001816	Uncharacterized protein.	Nitrogen permease regulator 3-like protein.	0.996
ENSFHEP00000017412	depdc5	ENSFHEP00000017412	ENSFHEP00000005599	Uncharacterized protein.	DEP domain containing 5.	0.979
ENSFHEP00000017412	nprl3	ENSFHEP00000017412	ENSFHEP00000001816	Uncharacterized protein.	Nitrogen permease regulator 3-like protein.	0.979
depdc5	ENSFHEP00000017385	ENSFHEP00000005599	ENSFHEP00000017385	DEP domain containing 5.	Uncharacterized protein.	0.996
depdc5	ENSFHEP00000017412	ENSFHEP00000005599	ENSFHEP00000017412	DEP domain containing 5.	Uncharacterized protein.	0.979
depdc5	nprl2	ENSFHEP00000005599	ENSFHEP00000017420	DEP domain containing 5.	NPR2 like, GATOR1 complex subunit.	0.996
depdc5	nprl3	ENSFHEP00000005599	ENSFHEP00000001816	DEP domain containing 5.	Nitrogen permease regulator 3-like protein.	0.999
mpg	nprl3	ENSFHEP00000001851	ENSFHEP00000001816	N-methylpurine DNA glycosylase.	Nitrogen permease regulator 3-like protein.	0.536
nprl2	depdc5	ENSFHEP00000017420	ENSFHEP00000005599	NPR2 like, GATOR1 complex subunit.	DEP domain containing 5.	0.996
nprl2	nprl3	ENSFHEP00000017420	ENSFHEP00000001816	NPR2 like, GATOR1 complex subunit.	Nitrogen permease regulator 3-like protein.	0.996
nprl3	ENSFHEP00000017385	ENSFHEP00000001816	ENSFHEP00000017385	Nitrogen permease regulator 3-like protein.	Uncharacterized protein.	0.996
nprl3	ENSFHEP00000017412	ENSFHEP00000001816	ENSFHEP00000017412	Nitrogen permease regulator 3-like protein.	Uncharacterized protein.	0.979
nprl3	depdc5	ENSFHEP00000001816	ENSFHEP00000005599	Nitrogen permease regulator 3-like protein.	DEP domain containing 5.	0.999
nprl3	mpg	ENSFHEP00000001816	ENSFHEP00000001851	Nitrogen permease regulator 3-like protein.	N-methylpurine DNA glycosylase.	0.536
nprl3	nprl2	ENSFHEP00000001816	ENSFHEP00000017420	Nitrogen permease regulator 3-like protein.	NPR2 like, GATOR1 complex subunit.	0.996