STRINGSTRING
ighmbp2 ighmbp2 LOC105925465 LOC105925465 spag7 spag7 r3hdm2 r3hdm2 parn parn r3hdm4 r3hdm4 nkrf nkrf LOC105932528 LOC105932528 LOC105915821 LOC105915821 YTHDC2 YTHDC2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ighmbp2Immunoglobulin mu DNA binding protein 2. (978 aa)
LOC105925465cAMP-regulated phosphoprotein 21. (645 aa)
spag7Sperm-associated antigen 7 homolog. (229 aa)
r3hdm2R3H domain containing 2. (1073 aa)
parnPoly(A)-specific ribonuclease (deadenylation nuclease). (639 aa)
r3hdm4R3H domain containing 4. (255 aa)
nkrfNFKB repressing factor. (775 aa)
LOC105932528R3H domain containing 1. (1028 aa)
LOC105915821Nuclear transcription factor, X-box binding 1. (1077 aa)
YTHDC2YTH domain containing 2. (1448 aa)
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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