STRINGSTRING
zranb2 zranb2 LOC105923396 LOC105923396 LOC105926683 LOC105926683 YAF2 YAF2 tab3 tab3 yaf2 yaf2 LOC105936151 LOC105936151 tab2 tab2 nploc4 nploc4 ewsr1 ewsr1 rybp rybp zranb3 zranb3 LOC105927321 LOC105927321 mdm4 mdm4 LOC105919098 LOC105919098 capn15 capn15 rnf31 rnf31 neil3 neil3 mdm2 mdm2 ZRANB1 ZRANB1 nup153 nup153 sharpin sharpin rbm5 rbm5 LOC105935999 LOC105935999 LOC105935866 LOC105935866
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
zranb2Zinc finger Ran-binding domain-containing protein 2; May interfere with constitutive 5'-splice site selection. Belongs to the ZRANB2 family. (320 aa)
LOC105923396TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (411 aa)
LOC105926683RanBP-type and C3HC4-type zinc finger-containing protein 1. (733 aa)
YAF2YY1 associated factor 2. (182 aa)
tab3TGF-beta activated kinase 1 (MAP3K7) binding protein 3. (606 aa)
yaf2YY1 associated factor 2. (186 aa)
LOC105936151RAN binding protein 2. (3084 aa)
tab2TGF-beta activated kinase 1 (MAP3K7) binding protein 2. (744 aa)
nploc4NPL4 homolog, ubiquitin recognition factor. (629 aa)
ewsr1EWS RNA-binding protein 1b. (599 aa)
rybpRING1 and YY1 binding protein b. (268 aa)
zranb3Zinc finger, RAN-binding domain containing 3. (1138 aa)
LOC105927321Zinc finger, RAN-binding domain containing 1b. (758 aa)
mdm4MDM4 regulator of p53. (511 aa)
LOC105919098Uncharacterized protein; Belongs to the peptidase C2 family. (933 aa)
capn15Calpain 15; Belongs to the peptidase C2 family. (1205 aa)
rnf31Ring finger protein 31. (987 aa)
neil3Nei-like DNA glycosylase 3. (577 aa)
mdm2MDM2 proto-oncogene. (559 aa)
ZRANB1Zinc finger RANBP2-type containing 1. (693 aa)
nup153Nucleoporin 153. (1289 aa)
sharpinSHANK-associated RH domain interacting protein. (436 aa)
rbm5RNA binding motif protein 5. (845 aa)
LOC105935999RanBP-type and C3HC4-type zinc finger-containing protein 1. (510 aa)
LOC105935866RNA binding motif protein 10. (905 aa)
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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