(57 nodes) Tetraspanin/Peripherin network (Fundulus heteroclitus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC105922355	Tetraspanin 37; Belongs to the tetraspanin (TM4SF) family. (143 aa)
	LOC105917666	Peripherin 2-like a. (366 aa)
	LOC105931391	Tetraspanin. (244 aa)
	TSPAN18	Tetraspanin. (278 aa)
	LOC105928129	Tetraspanin. (259 aa)
	LOC105915657	Tetraspanin. (272 aa)
	LOC105919133	Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family. (274 aa)
	CD151	Tetraspanin. (212 aa)
	LOC105915670	Tetraspanin. (230 aa)
	LOC105928695	Retinal outer segment membrane protein 1b. (361 aa)
	LOC105938588	CD82 molecule b; Belongs to the tetraspanin (TM4SF) family. (255 aa)
	TSPAN5	Tetraspanin. (291 aa)
	LOC105934014	Tetraspanin. (239 aa)
	LOC105933960	Tetraspanin. (229 aa)
	ENSFHEP00000024000	Tetraspanin. (282 aa)
	LOC105926549	Tetraspanin. (348 aa)
	LOC105932218	Retinal outer segment membrane protein 1a. (346 aa)
	cd63	Tetraspanin. (240 aa)
	LOC105938063	Tetraspanin. (284 aa)
	tspan3	Tetraspanin. (251 aa)
	LOC105924285	Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family. (117 aa)
	LOC105924224	Peripherin 2b (retinal degeneration, slow). (293 aa)
	LOC105926564	Tetraspanin. (270 aa)
	LOC105938064	Tetraspanin. (252 aa)
	LOC105918303	Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family. (247 aa)
	tspan18	Tetraspanin. (258 aa)
	ENSFHEP00000007871	Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family. (184 aa)
	prph2	Peripherin 2a (retinal degeneration, slow). (350 aa)
	LOC105937146	Tetraspanin. (239 aa)
	LOC105921874	Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family. (178 aa)
	tspan15	Tetraspanin. (283 aa)
	LOC105934371	Peripherin 2-like b. (361 aa)
	tspan7	Tetraspanin. (244 aa)
	tspan12	Tetraspanin. (309 aa)
	LOC105938526	Tetraspanin. (237 aa)
	LOC105930463	Tetraspanin. (247 aa)
	ENSFHEP00000011258	Tetraspanin. (284 aa)
	tspan17	Tetraspanin. (269 aa)
	LOC105915355	Tetraspanin. (354 aa)
	LOC105939015	Tetraspanin. (231 aa)
	LOC105915583	Tetraspanin. (225 aa)
	tspan4	Tetraspanin. (238 aa)
	LOC105935885	Tetraspanin. (212 aa)
	LOC105933423	Tetraspanin. (226 aa)
	tspan11	Tetraspanin. (334 aa)
	tspan13	Tetraspanin 13a; Belongs to the tetraspanin (TM4SF) family. (204 aa)
	tspan33	Tetraspanin. (283 aa)
	LOC105938805	Tetraspanin. (255 aa)
	cd81	Tetraspanin. (239 aa)
	LOC105928048	Tetraspanin. (228 aa)
	ENSFHEP00000031338	Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family. (138 aa)
	ENSFHEP00000029289	Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family. (215 aa)
	tspan31	Tetraspanin 31; Belongs to the tetraspanin (TM4SF) family. (193 aa)
	LOC105936704	Tetraspanin. (249 aa)
	LOC105929894	Tetraspanin. (207 aa)
	LOC105930425	Tetraspanin. (235 aa)
	LOC105918700	Tetraspanin. (192 aa)

Your Current Organism:

Fundulus heteroclitus

NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CD151	LOC105924285	ENSFHEP00000020101	ENSFHEP00000002329	Tetraspanin.	Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family.	0.870
ENSFHEP00000011258	LOC105918700	ENSFHEP00000011258	ENSFHEP00000012233	Tetraspanin.	Tetraspanin.	0.440
ENSFHEP00000011258	LOC105921874	ENSFHEP00000011258	ENSFHEP00000009026	Tetraspanin.	Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family.	0.420
ENSFHEP00000011258	LOC105928048	ENSFHEP00000011258	ENSFHEP00000031634	Tetraspanin.	Tetraspanin.	0.420
ENSFHEP00000011258	LOC105933960	ENSFHEP00000011258	ENSFHEP00000023265	Tetraspanin.	Tetraspanin.	0.426
ENSFHEP00000011258	LOC105935885	ENSFHEP00000011258	ENSFHEP00000034264	Tetraspanin.	Tetraspanin.	0.420
ENSFHEP00000011258	LOC105937146	ENSFHEP00000011258	ENSFHEP00000008285	Tetraspanin.	Tetraspanin.	0.426
ENSFHEP00000011258	LOC105938526	ENSFHEP00000011258	ENSFHEP00000010778	Tetraspanin.	Tetraspanin.	0.426
ENSFHEP00000011258	cd63	ENSFHEP00000011258	ENSFHEP00000024442	Tetraspanin.	Tetraspanin.	0.418
ENSFHEP00000011258	cd81	ENSFHEP00000011258	ENSFHEP00000032508	Tetraspanin.	Tetraspanin.	0.426
ENSFHEP00000011258	tspan33	ENSFHEP00000011258	ENSFHEP00000033143	Tetraspanin.	Tetraspanin.	0.416
ENSFHEP00000011258	tspan7	ENSFHEP00000011258	ENSFHEP00000010222	Tetraspanin.	Tetraspanin.	0.420
ENSFHEP00000024000	LOC105938588	ENSFHEP00000024000	ENSFHEP00000026212	Tetraspanin.	CD82 molecule b; Belongs to the tetraspanin (TM4SF) family.	0.460
ENSFHEP00000024000	LOC105938805	ENSFHEP00000024000	ENSFHEP00000033068	Tetraspanin.	Tetraspanin.	0.460
ENSFHEP00000024000	cd63	ENSFHEP00000024000	ENSFHEP00000024442	Tetraspanin.	Tetraspanin.	0.806
ENSFHEP00000024000	tspan31	ENSFHEP00000024000	ENSFHEP00000027668	Tetraspanin.	Tetraspanin 31; Belongs to the tetraspanin (TM4SF) family.	0.456
LOC105915355	tspan12	ENSFHEP00000035127	ENSFHEP00000010703	Tetraspanin.	Tetraspanin.	0.431
LOC105915670	LOC105935885	ENSFHEP00000020196	ENSFHEP00000034264	Tetraspanin.	Tetraspanin.	0.466
LOC105915670	cd63	ENSFHEP00000020196	ENSFHEP00000024442	Tetraspanin.	Tetraspanin.	0.579
LOC105917666	LOC105928695	ENSFHEP00000014561	ENSFHEP00000022268	Peripherin 2-like a.	Retinal outer segment membrane protein 1b.	0.767