STRINGSTRING
capn9 capn9 LOC105923340 LOC105923340 LOC105923339 LOC105923339 LOC105921154 LOC105921154 LOC105921155 LOC105921155 LOC105920350 LOC105920350 LOC105930766 LOC105930766 LOC105920176 LOC105920176 LOC105939571 LOC105939571 LOC105919907 LOC105919907 LOC105930200 LOC105930200 LOC105933712 LOC105933712
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
capn9Calpain-2 catalytic subunit; Belongs to the peptidase C2 family. (688 aa)
LOC105923340Uncharacterized protein; Belongs to the peptidase C2 family. (649 aa)
LOC105923339Uncharacterized protein; Belongs to the peptidase C2 family. (659 aa)
LOC105921154Calpain-3; Belongs to the peptidase C2 family. (778 aa)
LOC105921155Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family. (698 aa)
LOC105920350Calpain 5b; Belongs to the peptidase C2 family. (589 aa)
LOC105930766Calpain 3b; Belongs to the peptidase C2 family. (770 aa)
LOC105920176Calpain 2, (m/II) large subunit b; Belongs to the peptidase C2 family. (697 aa)
LOC105939571Calpain 3a, (p94); Belongs to the peptidase C2 family. (668 aa)
LOC105919907Calpain-5; Belongs to the peptidase C2 family. (642 aa)
LOC105930200Calpain 5a; Belongs to the peptidase C2 family. (637 aa)
LOC105933712Zgc:55262; Belongs to the peptidase C2 family. (660 aa)
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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