STRINGSTRING
rapgef5 rapgef5 tln2 tln2 fgg fgg LOC105940113 LOC105940113 ptpn1 ptpn1 rapgef3 rapgef3 tln1 tln1 LOC105938599 LOC105938599 itgb3 itgb3 raph1 raph1 SRC SRC LOC105932724 LOC105932724 fga fga fgb fgb fndc3a fndc3a LOC105918704 LOC105918704 LOC105918234 LOC105918234 ENSFHEP00000012898 ENSFHEP00000012898 syk syk fndc3b fndc3b cass4 cass4 LOC105934226 LOC105934226 LOC105927955 LOC105927955 shc1 shc1 LOC105926780 LOC105926780 CRK CRK pdpk1 pdpk1 LOC105931232 LOC105931232 SHC4 SHC4 LOC105935262 LOC105935262 RAPGEF4 RAPGEF4 grb2 grb2 tlnrd1 tlnrd1 LOC105930476 LOC105930476 bcar1 bcar1 RAPGEF5 RAPGEF5 rapgefl1 rapgefl1 LOC105935996 LOC105935996 LOC105916824 LOC105916824 LOC105930225 LOC105930225 LOC105921491 LOC105921491 RASGRP2 RASGRP2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rapgef5Rap guanine nucleotide exchange factor (GEF) 5a. (864 aa)
tln2Talin 2b. (2504 aa)
fggFibrinogen gamma chain. (400 aa)
LOC105940113Fibronectin 1a. (2504 aa)
ptpn1Tyrosine-protein phosphatase non-receptor type. (437 aa)
rapgef3Rap guanine nucleotide exchange factor (GEF) 3. (868 aa)
tln1Talin 1. (2541 aa)
LOC105938599Tyrosine-protein kinase. (499 aa)
itgb3Integrin beta; Belongs to the integrin beta chain family. (746 aa)
raph1Ras association (RalGDS/AF-6) and pleckstrin domains 1. (1447 aa)
SRCTyrosine-protein kinase. (548 aa)
LOC105932724Integrin beta; Belongs to the integrin beta chain family. (774 aa)
fgaFibrinogen alpha chain. (670 aa)
fgbFibrinogen beta chain. (478 aa)
fndc3aFibronectin type III domain containing 3A. (1238 aa)
LOC105918704Ras-related protein Rap-1A. (184 aa)
LOC105918234Tyrosine-protein kinase. (550 aa)
ENSFHEP00000012898Neural precursor cell expressed, developmentally down-regulated 9. (681 aa)
sykTyrosine-protein kinase. (621 aa)
fndc3bFibronectin type III domain containing 3Ba. (1207 aa)
cass4Cas scaffolding family protein member 4. (800 aa)
LOC105934226Zgc:171558. (996 aa)
LOC105927955Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (479 aa)
shc1SHC (Src homology 2 domain containing) transforming protein 1. (486 aa)
LOC105926780Uncharacterized protein. (340 aa)
CRKCRK proto-oncogene, adaptor protein. (319 aa)
pdpk13-phosphoinositide dependent protein kinase 1b. (563 aa)
LOC105931232Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (479 aa)
SHC4SHC adaptor protein 4. (392 aa)
LOC105935262RAP1A, member of RAS oncogene family a. (185 aa)
RAPGEF4Rap guanine nucleotide exchange factor 4. (758 aa)
grb2Growth factor receptor-bound protein 2b. (217 aa)
tlnrd1Talin rod domain containing 1. (355 aa)
LOC105930476Talin 2a. (2542 aa)
bcar1BCAR1 scaffold protein, Cas family member. (999 aa)
RAPGEF5Uncharacterized protein. (492 aa)
rapgefl1Rap guanine nucleotide exchange factor (GEF)-like 1. (396 aa)
LOC105935996Uncharacterized protein. (185 aa)
LOC105916824Embryonal Fyn-associated substrate. (934 aa)
LOC105930225Uncharacterized protein. (483 aa)
LOC105921491Ras association (RalGDS/AF-6) and pleckstrin homology domains 1b. (1509 aa)
RASGRP2RAS guanyl releasing protein 2. (609 aa)
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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