STRINGSTRING
LOC105928015 LOC105928015 rpl7 rpl7 rps17 rps17 eif3a eif3a rpl37a rpl37a LOC105916325 LOC105916325 eif3l eif3l rpl23 rpl23 eif3j eif3j rps4x rps4x RPL27A RPL27A rps24 rps24 rpl34 rpl34 rpl35 rpl35 rpl32 rpl32 eif3g eif3g rps2 rps2 rplp0 rplp0 LOC105937277 LOC105937277 LOC105936825 LOC105936825 rpl4 rpl4 rps15 rps15 rpl13 rpl13 RSRC1 RSRC1 ENSFHEP00000025038 ENSFHEP00000025038 RPL3L RPL3L rpl18 rpl18 rps3 rps3 rps16 rps16 rps6 rps6 LOC105928521 LOC105928521 ENSFHEP00000033608 ENSFHEP00000033608 rpl31 rpl31 eif3m eif3m LOC105939437 LOC105939437 rps13 rps13 RPL30 RPL30 rps7 rps7 RPS20 RPS20 rps23 rps23 rpl15 rpl15 rps12 rps12 RPS29 RPS29 ENSFHEP00000032075 ENSFHEP00000032075 rpl39 rpl39 eif3i eif3i rpl14 rpl14 rps10 rps10 rpl21 rpl21 LOC105938893 LOC105938893 rps21 rps21 rpl29 rpl29 rpl11 rpl11 LOC105916387 LOC105916387 RPL5-2 RPL5-2 rpl24 rpl24 eif3f eif3f rpl36 rpl36 LOC105935138 LOC105935138 rpl7l1 rpl7l1 rpl12 rpl12 rpl18a rpl18a ENSFHEP00000025750 ENSFHEP00000025750 eif3k eif3k rps18 rps18 LOC105931547 LOC105931547 kxd1 kxd1 rpl35a rpl35a rps27a rps27a rpl17 rpl17 RPL7A RPL7A eif3b eif3b LOC105939229 LOC105939229 rps14 rps14 rpl13a rpl13a eif3h eif3h ENSFHEP00000004789 ENSFHEP00000004789 rps28 rps28 LOC105916670 LOC105916670 rpl27 rpl27 rpl3 rpl3 rpl22l1 rpl22l1 rps8 rps8 rpl37 rpl37 rpl28 rpl28 rps26 rps26 rps3a rps3a rpl9 rpl9 rplp1 rplp1 eif3e eif3e rpl38 rpl38 rpl6 rpl6 rps5 rps5 rpl8 rpl8 rpsa rpsa ENSFHEP00000009411 ENSFHEP00000009411 RPL5 RPL5 rpl10 rpl10 rps19 rps19 LOC105918681 LOC105918681 RPL19 RPL19 LOC105921137 LOC105921137 LOC105923102 LOC105923102 LOC105917567 LOC105917567 rsad1 rsad1 ENSFHEP00000013490 ENSFHEP00000013490 rps25 rps25 RPL19-2 RPL19-2 rps15a rps15a rps9 rps9 ENSFHEP00000015303 ENSFHEP00000015303 rpl23a rpl23a LOC105921030 LOC105921030
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC10592801560S acidic ribosomal protein P2; Belongs to the eukaryotic ribosomal protein P1/P2 family. (115 aa)
rpl7Ribosomal protein L7. (174 aa)
rps17Uncharacterized protein. (135 aa)
eif3aEukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (1267 aa)
rpl37aRibosomal protein L37a. (92 aa)
LOC105916325Ribosomal protein, large P2, like; Belongs to the eukaryotic ribosomal protein P1/P2 family. (115 aa)
eif3lEukaryotic translation initiation factor 3 subunit L; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (570 aa)
rpl23Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. (126 aa)
eif3jEukaryotic translation initiation factor 3 subunit J; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (243 aa)
rps4x40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (264 aa)
RPL27ARibosomal protein L27a; Belongs to the universal ribosomal protein uL15 family. (148 aa)
rps2440S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (139 aa)
rpl34Ribosomal protein L34. (117 aa)
rpl35Ribosomal protein L35. (123 aa)
rpl32Ribosomal protein L32. (93 aa)
eif3gEukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA. (297 aa)
rps2Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (279 aa)
rplp060S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (315 aa)
LOC105937277NAD(P)-bd_dom domain-containing protein. (216 aa)
LOC10593682540S ribosomal protein S27. (138 aa)
rpl4Ribosomal protein L4. (368 aa)
rps1540S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (145 aa)
rpl1360S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (211 aa)
RSRC1Arginine and serine rich coiled-coil 1. (331 aa)
ENSFHEP00000025038eIF3_N domain-containing protein. (37 aa)
RPL3LRibosomal protein L3 like. (329 aa)
rpl18Ribosomal protein L18. (190 aa)
rps3Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (245 aa)
rps16Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (146 aa)
rps640S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
LOC10592852140S ribosomal protein S27. (133 aa)
ENSFHEP00000033608Uncharacterized protein. (77 aa)
rpl31Ribosomal protein L31. (124 aa)
eif3mEukaryotic translation initiation factor 3 subunit M; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (375 aa)
LOC105939437Mical-like 2b. (688 aa)
rps13Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (108 aa)
RPL30Ribosomal protein L30. (95 aa)
rps740S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (170 aa)
RPS20Ribosomal protein S20. (119 aa)
rps23Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (147 aa)
rpl15Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
rps1240S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (211 aa)
RPS29Ribosomal protein S29. (66 aa)
ENSFHEP0000003207560S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (64 aa)
rpl39Ribosomal protein L39. (51 aa)
eif3iEukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (325 aa)
rpl14Ribosomal protein L14. (137 aa)
rps10Ribosomal protein S10. (166 aa)
rpl21Ribosomal protein L21. (160 aa)
LOC105938893ADP-ribosylation factor-like 6 interacting protein 1. (203 aa)
rps21Ribosomal protein S21. (137 aa)
rpl2960S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (64 aa)
rpl11Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (178 aa)
LOC10591638740S ribosomal S17-like protein. (134 aa)
RPL5-2Ribosomal protein L5. (299 aa)
rpl24Ribosomal protein L24. (157 aa)
eif3fEukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (273 aa)
rpl3660S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (105 aa)
LOC10593513840S ribosomal protein S27. (95 aa)
rpl7l1Ribosomal protein L7-like 1. (251 aa)
rpl12Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (227 aa)
rpl18a60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (176 aa)
ENSFHEP00000025750Ribosomal_L18e/L15P domain-containing protein. (69 aa)
eif3kEukaryotic translation initiation factor 3 subunit K; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (220 aa)
rps18Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (152 aa)
LOC105931547Ribosomal protein L26. (180 aa)
kxd1KxDL motif containing 1. (184 aa)
rpl35aRibosomal protein L35a. (110 aa)
rps27aRibosomal protein S27a. (156 aa)
rpl17Ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family. (235 aa)
RPL7ARibosomal protein L7a. (266 aa)
eif3bEukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family. (682 aa)
LOC105939229Ribosomal protein L22. (130 aa)
rps14Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (167 aa)
rpl13aRibosomal protein L13a; Belongs to the universal ribosomal protein uL13 family. (205 aa)
eif3hEukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (341 aa)
ENSFHEP00000004789Ribosomal_S17_N domain-containing protein. (75 aa)
rps28Ribosomal protein S28. (69 aa)
LOC105916670Eukaryotic translation initiation factor 1A, Y-chromosomal; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. (144 aa)
rpl2760S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (113 aa)
rpl3Ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (378 aa)
rpl22l1Ribosomal protein L22-like 1. (131 aa)
rps840S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (208 aa)
rpl37Ribosomal protein L37; Binds to the 23S rRNA. (92 aa)
rpl28Ribosomal protein L28. (169 aa)
rps2640S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (120 aa)
rps3a40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (266 aa)
rpl9Ribosomal protein L9. (193 aa)
rplp1Ribosomal protein, large, P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (114 aa)
eif3eEukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (445 aa)
rpl38Ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family. (70 aa)
rpl6Ribosomal protein L6. (259 aa)
rps5Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (203 aa)
rpl8Ribosomal protein L8. (257 aa)
rpsa40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (307 aa)
ENSFHEP00000009411Uncharacterized protein. (139 aa)
RPL5Ribosomal protein L5b. (292 aa)
rpl10Ribosomal protein L10. (215 aa)
rps19Ribosomal protein S19. (146 aa)
LOC105918681Ribosomal_L18e/L15P domain-containing protein. (135 aa)
RPL19Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (194 aa)
LOC105921137Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family. (149 aa)
LOC105923102Uncharacterized protein. (214 aa)
LOC105917567Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (928 aa)
rsad1Radical S-adenosyl methionine domain-containing protein; May be a heme chaperone, appears to bind heme. Homologous bacterial proteins do not have oxygen-independent coproporphyrinogen- III oxidase activity. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L- methionine; Belongs to the anaerobic coproporphyrinogen-III oxidase family. (439 aa)
ENSFHEP00000013490Uncharacterized protein. (58 aa)
rps2540S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (123 aa)
RPL19-2Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (197 aa)
rps15aRibosomal protein S15a; Belongs to the universal ribosomal protein uS8 family. (153 aa)
rps9Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (194 aa)
ENSFHEP0000001530340S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (110 aa)
rpl23aRibosomal protein L23a; Belongs to the universal ribosomal protein uL23 family. (155 aa)
LOC105921030Uncharacterized protein. (130 aa)
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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