70 items (Fundulus heteroclitus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rabgef1	RAB guanine nucleotide exchange factor (GEF) 1. (505 aa)
	ulk2	Unc-51 like autophagy activating kinase 2. (1067 aa)
	LOC105935836	TBC1 domain family, member 10Ab. (466 aa)
	tbc1d2b	TBC1 domain family, member 2B. (1029 aa)
	rab8b	Multiple EGF-like-domains 8. (207 aa)
	LOC105939790	RAB11a, member RAS oncogene family, like. (209 aa)
	LOC105939716	Synaptotagmin-like 2b. (1360 aa)
	LOC105938046	Uncharacterized protein. (648 aa)
	LOC105926030	RAB7a, member RAS oncogene family. (234 aa)
	arl15	ADP-ribosylation factor-like 15a. (257 aa)
	tbc1d17	TBC1 domain family, member 17. (639 aa)
	tbc1d2	TBC1 domain family, member 2. (1126 aa)
	rab33b	RAB33B, member RAS oncogene family a. (240 aa)
	LOC105932864	TBC1 domain family, member 7. (294 aa)
	RAB7A	RAB7A, member RAS oncogene family. (207 aa)
	sytl1	Synaptotagmin 1-like protein. (532 aa)
	cunh9orf116	Uncharacterized protein. (171 aa)
	LOC105919467	TSC complex subunit 1. (1034 aa)
	tbc1d30	TBC1 domain family, member 30. (865 aa)
	tsc2	TSC complex subunit 2. (1700 aa)
	LOC105931035	RAB8A, member RAS oncogene family. (206 aa)
	rab4a	RAB4a, member RAS oncogene family. (213 aa)
	LOC105918215	Si:dkeyp-19e1.3. (810 aa)
	ENSFHEP00000009916	Unc-51 like autophagy activating kinase 1. (944 aa)
	LOC105927564	Zgc:101559. (234 aa)
	ENSFHEP00000010378	Rab-GAP TBC domain-containing protein. (151 aa)
	LOC105920483	Uncharacterized protein. (314 aa)
	ENSFHEP00000012457	DUF3694 domain-containing protein. (225 aa)
	LOC105927559	Growth hormone regulated TBC protein 1b. (353 aa)
	LOC105930418	RAB5A, member RAS oncogene family, a. (216 aa)
	LOC105927446	TSC complex subunit 1b. (1254 aa)
	RAB41	RAB41, member RAS oncogene family. (215 aa)
	ENSFHEP00000014582	Uncharacterized protein. (338 aa)
	ENSFHEP00000014758	Uncharacterized protein. (112 aa)
	TBC1D13	TBC1 domain family member 13. (369 aa)
	LOC105934208	Uncharacterized protein. (218 aa)
	LOC105937695	USP6 N-terminal-like protein. (543 aa)
	tbc1d15	TBC1 domain family, member 15. (656 aa)
	LOC105938796	RAB11a, member RAS oncogene family. (215 aa)
	TBC1D14	TBC1 domain family member 14. (711 aa)
	LOC105927693	RAB33A, member RAS oncogene family. (239 aa)
	rabep1	Rabaptin, RAB GTPase binding effector protein 1. (860 aa)
	LOC105932471	RAB11B, member RAS oncogene family, a. (218 aa)
	LOC105920864	Uncharacterized protein. (206 aa)
	LOC105937490	TBC1 domain family, member 10b. (326 aa)
	LOC105928776	Unc-51 like autophagy activating kinase 1a. (695 aa)
	tbc1d25	TBC1 domain family, member 25. (855 aa)
	LOC105928795	TBC1 domain family, member 10Aa. (516 aa)
	ENSFHEP00000021864	Uncharacterized protein. (172 aa)
	tbc1d24	TBC1 domain family, member 24. (565 aa)
	LOC105933563	Uncharacterized protein. (508 aa)
	gga3	Golgi associated, gamma adaptin ear containing, ARF binding protein 3a. (732 aa)
	rab8a	Uncharacterized protein. (286 aa)
	rab35	RAB35, member RAS oncogene family b. (201 aa)
	GRTP1	Growth hormone regulated TBC protein 1b. (353 aa)
	LOC105927473	Si:ch211-218d20.15. (236 aa)
	LOC105922570	Rab-GAP TBC domain-containing protein. (668 aa)
	LOC105918767	RAB GTPase activating protein 1-like 2. (344 aa)
	rabgap1	RAB GTPase activating protein 1. (1081 aa)
	rab5c	RAB5C, member RAS oncogene family. (220 aa)
	LOC105919338	Uncharacterized protein. (568 aa)
	LOC105932627	TBC1 domain family, member 10C. (1200 aa)
	LOC105931510	Golgi associated, gamma adaptin ear containing, ARF binding protein 1. (636 aa)
	LOC105938887	Si:dkey-16l2.16. (162 aa)
	LOC105932584	RAB guanine nucleotide exchange factor (GEF) 1, like. (504 aa)
	optn	Optineurin. (525 aa)
	LOC105929083	ADP-ribosylation factor 6b; Belongs to the small GTPase superfamily. Arf family. (184 aa)
	rabep2	Rabaptin, RAB GTPase binding effector protein 2. (471 aa)
	ENSFHEP00000034492	TBC1 domain family, member 16. (313 aa)
	LOC105932459	RAB11B, member RAS oncogene family, b. (218 aa)

Your Current Organism:

Fundulus heteroclitus

NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSFHEP00000009916	ENSFHEP00000010378	ENSFHEP00000009916	ENSFHEP00000010378	Unc-51 like autophagy activating kinase 1.	Rab-GAP TBC domain-containing protein.	0.605
ENSFHEP00000009916	LOC105922570	ENSFHEP00000009916	ENSFHEP00000027931	Unc-51 like autophagy activating kinase 1.	Rab-GAP TBC domain-containing protein.	0.605
ENSFHEP00000009916	LOC105928776	ENSFHEP00000009916	ENSFHEP00000021574	Unc-51 like autophagy activating kinase 1.	Unc-51 like autophagy activating kinase 1a.	0.944
ENSFHEP00000009916	LOC105932459	ENSFHEP00000009916	ENSFHEP00000034785	Unc-51 like autophagy activating kinase 1.	RAB11B, member RAS oncogene family, b.	0.544
ENSFHEP00000009916	LOC105932471	ENSFHEP00000009916	ENSFHEP00000020702	Unc-51 like autophagy activating kinase 1.	RAB11B, member RAS oncogene family, a.	0.544
ENSFHEP00000009916	LOC105934208	ENSFHEP00000009916	ENSFHEP00000016653	Unc-51 like autophagy activating kinase 1.	Uncharacterized protein.	0.544
ENSFHEP00000009916	LOC105938796	ENSFHEP00000009916	ENSFHEP00000017883	Unc-51 like autophagy activating kinase 1.	RAB11a, member RAS oncogene family.	0.544
ENSFHEP00000009916	LOC105939790	ENSFHEP00000009916	ENSFHEP00000002245	Unc-51 like autophagy activating kinase 1.	RAB11a, member RAS oncogene family, like.	0.544
ENSFHEP00000009916	TBC1D14	ENSFHEP00000009916	ENSFHEP00000020076	Unc-51 like autophagy activating kinase 1.	TBC1 domain family member 14.	0.605
ENSFHEP00000009916	tsc2	ENSFHEP00000009916	ENSFHEP00000008712	Unc-51 like autophagy activating kinase 1.	TSC complex subunit 2.	0.552
ENSFHEP00000009916	ulk2	ENSFHEP00000009916	ENSFHEP00000000440	Unc-51 like autophagy activating kinase 1.	Unc-51 like autophagy activating kinase 2.	0.941
ENSFHEP00000010378	ENSFHEP00000009916	ENSFHEP00000010378	ENSFHEP00000009916	Rab-GAP TBC domain-containing protein.	Unc-51 like autophagy activating kinase 1.	0.605
ENSFHEP00000010378	LOC105922570	ENSFHEP00000010378	ENSFHEP00000027931	Rab-GAP TBC domain-containing protein.	Rab-GAP TBC domain-containing protein.	0.932
ENSFHEP00000010378	LOC105928776	ENSFHEP00000010378	ENSFHEP00000021574	Rab-GAP TBC domain-containing protein.	Unc-51 like autophagy activating kinase 1a.	0.605
ENSFHEP00000010378	LOC105932459	ENSFHEP00000010378	ENSFHEP00000034785	Rab-GAP TBC domain-containing protein.	RAB11B, member RAS oncogene family, b.	0.612
ENSFHEP00000010378	LOC105932471	ENSFHEP00000010378	ENSFHEP00000020702	Rab-GAP TBC domain-containing protein.	RAB11B, member RAS oncogene family, a.	0.612
ENSFHEP00000010378	LOC105934208	ENSFHEP00000010378	ENSFHEP00000016653	Rab-GAP TBC domain-containing protein.	Uncharacterized protein.	0.612
ENSFHEP00000010378	LOC105938796	ENSFHEP00000010378	ENSFHEP00000017883	Rab-GAP TBC domain-containing protein.	RAB11a, member RAS oncogene family.	0.612
ENSFHEP00000010378	LOC105939790	ENSFHEP00000010378	ENSFHEP00000002245	Rab-GAP TBC domain-containing protein.	RAB11a, member RAS oncogene family, like.	0.612
ENSFHEP00000010378	ulk2	ENSFHEP00000010378	ENSFHEP00000000440	Rab-GAP TBC domain-containing protein.	Unc-51 like autophagy activating kinase 2.	0.605