STRINGSTRING
rpl37 rpl37 RPL3L RPL3L rpl18 rpl18 rps3 rps3 rps16 rps16 rps6 rps6 LOC105928521 LOC105928521 ENSFHEP00000033608 ENSFHEP00000033608 rpl31 rpl31 rps13 rps13 RPL30 RPL30 rps7 rps7 RPS20 RPS20 rps23 rps23 rpl15 rpl15 rps12 rps12 RPS29 RPS29 ENSFHEP00000032075 ENSFHEP00000032075 rpl39 rpl39 rpl14 rpl14 rps10 rps10 rpl21 rpl21 UPF1 UPF1 LOC105938893 LOC105938893 rps21 rps21 rpl29 rpl29 rpl11 rpl11 LOC105916387 LOC105916387 RPL5-2 RPL5-2 rpl24 rpl24 rpl36 rpl36 LOC105935138 LOC105935138 rpl7l1 rpl7l1 rpl12 rpl12 rpl18a rpl18a ENSFHEP00000025750 ENSFHEP00000025750 rps18 rps18 LOC105931547 LOC105931547 kxd1 kxd1 RSRC1 RSRC1 rpl13 rpl13 rps15 rps15 rpl4 rpl4 LOC105936825 LOC105936825 LOC105937277 LOC105937277 rplp0 rplp0 LOC105927090 LOC105927090 rps2 rps2 rpl32 rpl32 rpl35 rpl35 rpl34 rpl34 rps24 rps24 RPL27A RPL27A rps4x rps4x rpl23 rpl23 pabpc1 pabpc1 LOC105916325 LOC105916325 rpl37a rpl37a rps17 rps17 rpl7 rpl7 LOC105928015 LOC105928015 LOC105921030 LOC105921030 rpl23a rpl23a ENSFHEP00000015303 ENSFHEP00000015303 rps9 rps9 rps15a rps15a RPL19-2 RPL19-2 rps25 rps25 rsad1 rsad1 LOC105923102 LOC105923102 LOC105921137 LOC105921137 RPL19 RPL19 NCBP1 NCBP1 rnpepl1 rnpepl1 LOC105918681 LOC105918681 rps19 rps19 rpl10 rpl10 RPL5 RPL5 ENSFHEP00000009411 ENSFHEP00000009411 rpsa rpsa rpl8 rpl8 rps5 rps5 LOC105937971 LOC105937971 rpl6 rpl6 rpl38 rpl38 rplp1 rplp1 rpl9 rpl9 rps3a rps3a LOC105935109 LOC105935109 rps26 rps26 rpl28 rpl28 pabpc4 pabpc4 rps8 rps8 rpl22l1 rpl22l1 rpl3 rpl3 rpl27 rpl27 LOC105933890 LOC105933890 rps28 rps28 ENSFHEP00000004789 ENSFHEP00000004789 rpl13a rpl13a rps14 rps14 LOC105939229 LOC105939229 ncbp2 ncbp2 RPL7A RPL7A rpl17 rpl17 etf1 etf1 rps27a rps27a rpl35a rpl35a
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rpl37Ribosomal protein L37; Binds to the 23S rRNA. (92 aa)
RPL3LRibosomal protein L3 like. (329 aa)
rpl18Ribosomal protein L18. (190 aa)
rps3Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (245 aa)
rps16Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (146 aa)
rps640S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
LOC10592852140S ribosomal protein S27. (133 aa)
ENSFHEP00000033608Uncharacterized protein. (77 aa)
rpl31Ribosomal protein L31. (124 aa)
rps13Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (108 aa)
RPL30Ribosomal protein L30. (95 aa)
rps740S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (170 aa)
RPS20Ribosomal protein S20. (119 aa)
rps23Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (147 aa)
rpl15Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
rps1240S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (211 aa)
RPS29Ribosomal protein S29. (66 aa)
ENSFHEP0000003207560S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (64 aa)
rpl39Ribosomal protein L39. (51 aa)
rpl14Ribosomal protein L14. (137 aa)
rps10Ribosomal protein S10. (166 aa)
rpl21Ribosomal protein L21. (160 aa)
UPF1UPF1 RNA helicase and ATPase. (991 aa)
LOC105938893ADP-ribosylation factor-like 6 interacting protein 1. (203 aa)
rps21Ribosomal protein S21. (137 aa)
rpl2960S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (64 aa)
rpl11Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (178 aa)
LOC10591638740S ribosomal S17-like protein. (134 aa)
RPL5-2Ribosomal protein L5. (299 aa)
rpl24Ribosomal protein L24. (157 aa)
rpl3660S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (105 aa)
LOC10593513840S ribosomal protein S27. (95 aa)
rpl7l1Ribosomal protein L7-like 1. (251 aa)
rpl12Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (227 aa)
rpl18a60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (176 aa)
ENSFHEP00000025750Ribosomal_L18e/L15P domain-containing protein. (69 aa)
rps18Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (152 aa)
LOC105931547Ribosomal protein L26. (180 aa)
kxd1KxDL motif containing 1. (184 aa)
RSRC1Arginine and serine rich coiled-coil 1. (331 aa)
rpl1360S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (211 aa)
rps1540S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (145 aa)
rpl4Ribosomal protein L4. (368 aa)
LOC10593682540S ribosomal protein S27. (138 aa)
LOC105937277NAD(P)-bd_dom domain-containing protein. (216 aa)
rplp060S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (315 aa)
LOC105927090Poly(A) binding protein, cytoplasmic 1-like. (644 aa)
rps2Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (279 aa)
rpl32Ribosomal protein L32. (93 aa)
rpl35Ribosomal protein L35. (123 aa)
rpl34Ribosomal protein L34. (117 aa)
rps2440S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (139 aa)
RPL27ARibosomal protein L27a; Belongs to the universal ribosomal protein uL15 family. (148 aa)
rps4x40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (264 aa)
rpl23Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. (126 aa)
pabpc1Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (635 aa)
LOC105916325Ribosomal protein, large P2, like; Belongs to the eukaryotic ribosomal protein P1/P2 family. (115 aa)
rpl37aRibosomal protein L37a. (92 aa)
rps17Uncharacterized protein. (135 aa)
rpl7Ribosomal protein L7. (174 aa)
LOC10592801560S acidic ribosomal protein P2; Belongs to the eukaryotic ribosomal protein P1/P2 family. (115 aa)
LOC105921030Uncharacterized protein. (130 aa)
rpl23aRibosomal protein L23a; Belongs to the universal ribosomal protein uL23 family. (155 aa)
ENSFHEP0000001530340S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (110 aa)
rps9Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (194 aa)
rps15aRibosomal protein S15a; Belongs to the universal ribosomal protein uS8 family. (153 aa)
RPL19-2Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (197 aa)
rps2540S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (123 aa)
rsad1Radical S-adenosyl methionine domain-containing protein; May be a heme chaperone, appears to bind heme. Homologous bacterial proteins do not have oxygen-independent coproporphyrinogen- III oxidase activity. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L- methionine; Belongs to the anaerobic coproporphyrinogen-III oxidase family. (439 aa)
LOC105923102Uncharacterized protein. (214 aa)
LOC105921137Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family. (149 aa)
RPL19Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (194 aa)
NCBP1Nuclear cap binding protein subunit 1. (796 aa)
rnpepl1Arginyl aminopeptidase like 1. (556 aa)
LOC105918681Ribosomal_L18e/L15P domain-containing protein. (135 aa)
rps19Ribosomal protein S19. (146 aa)
rpl10Ribosomal protein L10. (215 aa)
RPL5Ribosomal protein L5b. (292 aa)
ENSFHEP00000009411Uncharacterized protein. (139 aa)
rpsa40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (307 aa)
rpl8Ribosomal protein L8. (257 aa)
rps5Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (203 aa)
LOC105937971G1 to S phase transition 1, like. (561 aa)
rpl6Ribosomal protein L6. (259 aa)
rpl38Ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family. (70 aa)
rplp1Ribosomal protein, large, P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (114 aa)
rpl9Ribosomal protein L9. (193 aa)
rps3a40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (266 aa)
LOC105935109Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (634 aa)
rps2640S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (120 aa)
rpl28Ribosomal protein L28. (169 aa)
pabpc4Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (626 aa)
rps840S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (208 aa)
rpl22l1Ribosomal protein L22-like 1. (131 aa)
rpl3Ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (378 aa)
rpl2760S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (113 aa)
LOC105933890Uncharacterized protein. (1110 aa)
rps28Ribosomal protein S28. (69 aa)
ENSFHEP00000004789Ribosomal_S17_N domain-containing protein. (75 aa)
rpl13aRibosomal protein L13a; Belongs to the universal ribosomal protein uL13 family. (205 aa)
rps14Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (167 aa)
LOC105939229Ribosomal protein L22. (130 aa)
ncbp2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (164 aa)
RPL7ARibosomal protein L7a. (266 aa)
rpl17Ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family. (235 aa)
etf1Eukaryotic peptide chain release factor subunit 1. (443 aa)
rps27aRibosomal protein S27a. (156 aa)
rpl35aRibosomal protein L35a. (110 aa)
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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