STRINGSTRING
scap scap disp1 disp1 NPC1L1 NPC1L1 ptch2 ptch2 ptch1 ptch1 npc1 npc1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
scapSREBF chaperone. (1211 aa)
disp1Dispatched homolog 1 (Drosophila). (671 aa)
NPC1L1NPC1 like intracellular cholesterol transporter 1. (1274 aa)
ptch2Patched 2. (1299 aa)
ptch1Patched 1. (1417 aa)
npc1Niemann-Pick disease, type C1. (1271 aa)
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.