STRINGSTRING
nags nags got1 got1 idh3g idh3g GOT1 GOT1 LOC105932345 LOC105932345 got2 got2 aco1 aco1 LOC105932857 LOC105932857 cs cs ACO2 ACO2 ireb2 ireb2 idh3a idh3a LOC105917198 LOC105917198 LOC105932871 LOC105932871 gpt gpt LOC105936304 LOC105936304 idh1 idh1 aadat aadat LOC105919972 LOC105919972 LOC105935391 LOC105935391 acy1 acy1 LOC105940129 LOC105940129 LOC105916414 LOC105916414
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
nagsN-acetylglutamate synthase. (533 aa)
got1Aspartate aminotransferase. (410 aa)
idh3gIsocitrate dehydrogenase [NAD] subunit, mitochondrial. (306 aa)
GOT1Aspartate aminotransferase. (410 aa)
LOC105932345Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (466 aa)
got2Aspartate aminotransferase. (428 aa)
aco1Aconitase 1, soluble; Belongs to the aconitase/IPM isomerase family. (894 aa)
LOC105932857Aminotran_1_2 domain-containing protein. (565 aa)
csCitrate synthase; Belongs to the citrate synthase family. (428 aa)
ACO2Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family. (789 aa)
ireb2Iron-responsive element binding protein 2; Belongs to the aconitase/IPM isomerase family. (999 aa)
idh3aIsocitrate dehydrogenase (NAD(+)) 3 alpha. (308 aa)
LOC105917198Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. (413 aa)
LOC105932871Aminotran_1_2 domain-containing protein. (446 aa)
gptSi:ch211-217a12.1. (543 aa)
LOC105936304Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. (383 aa)
idh1Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (414 aa)
aadatAminoadipate aminotransferase. (434 aa)
LOC105919972Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family. (782 aa)
LOC105935391Aminotran_1_2 domain-containing protein. (532 aa)
acy1Aminoacylase 1. (225 aa)
LOC105940129Aminotran_1_2 domain-containing protein. (516 aa)
LOC105916414Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (453 aa)
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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