STRINGSTRING
ENSFHEP00000016354 ENSFHEP00000016354 rpl7 rpl7 rps17 rps17 LOC105934218 LOC105934218 rpl37a rpl37a LOC105924827 LOC105924827 fau fau mrpl18 mrpl18 grhl2 grhl2 LOC105916325 LOC105916325 rpl23 rpl23 rps4x rps4x RPL27A RPL27A COPB2 COPB2 ENSFHEP00000018723 ENSFHEP00000018723 rps24 rps24 rpl34 rpl34 rpl35 rpl35 ENSFHEP00000020242 ENSFHEP00000020242 mrps16 mrps16 mrpl19 mrpl19 mrto4 mrto4 mrps15 mrps15 lyrm9 lyrm9 rpl32 rpl32 LOC105921927 LOC105921927 ppp1r26 ppp1r26 rps2 rps2 etfa etfa mrpl32 mrpl32 mrps7 mrps7 slc25a19 slc25a19 ENSFHEP00000022745 ENSFHEP00000022745 rplp0 rplp0 LOC105936825 LOC105936825 rpl10a rpl10a mrps12 mrps12 mrpl20 mrpl20 rpl4 rpl4 mrpl10 mrpl10 rps15 rps15 rpl13 rpl13 nsa2 nsa2 cops4 cops4 LOC105927697 LOC105927697 mrpl28 mrpl28 RSRC1 RSRC1 mrpl27 mrpl27 REELD1 REELD1 ENSFHEP00000025244 ENSFHEP00000025244 LOC105931547 LOC105931547 mrps5 mrps5 rps18 rps18 ENSFHEP00000025750 ENSFHEP00000025750 dock4 dock4 mrps10 mrps10 rpl35a rpl35a rps27a rps27a mrps11 mrps11 ENSFHEP00000000656 ENSFHEP00000000656 veph1 veph1 trmt44 trmt44 mrpl13 mrpl13 ENSFHEP00000001155 ENSFHEP00000001155 mrpl2 mrpl2 slc25a16 slc25a16 rpl17 rpl17 RPL7A RPL7A mrpl4 mrpl4 LOC105939229 LOC105939229 cunh1orf53 cunh1orf53 rps14 rps14 cetn3 cetn3 wdr46 wdr46 rpl13a rpl13a mrpl14 mrpl14 naa40 naa40 ENSFHEP00000004492 ENSFHEP00000004492 mrpl34 mrpl34 ENSFHEP00000004789 ENSFHEP00000004789 rps28 rps28 ptcd3 ptcd3 ifi35 ifi35 rpl27 rpl27 rpl3 rpl3 tfcp2 tfcp2 mrpl17 mrpl17 rpl22l1 rpl22l1 grhl1 grhl1 rps8 rps8 rpl37 rpl37 rpl28 rpl28 ubp1 ubp1 LOC105935070 LOC105935070 psmd5 psmd5 rps26 rps26 rps3a rps3a LOC105936692 LOC105936692 mrps9 mrps9 mrps18a mrps18a mrpl35 mrpl35 rpl18a rpl18a rpl12 rpl12 ENSFHEP00000027906 ENSFHEP00000027906 ccdc105 ccdc105 rpl7l1 rpl7l1 LOC105935138 LOC105935138 rpl36 rpl36 mrpl1 mrpl1 rpl24 rpl24 RPL5-2 RPL5-2 mrpl12 mrpl12 LOC105916387 LOC105916387 rpl11 rpl11 LOC105929198 LOC105929198 eloa eloa rpl29 rpl29 rps21 rps21 LOC105938893 LOC105938893 uba52 uba52 eed eed rpl21 rpl21 rps10 rps10 rpl9 rpl9 tsen34 tsen34 rplp1 rplp1 rpl38 rpl38 rpl6 rpl6 rps5 rps5 mrpl33 mrpl33 ENSFHEP00000008396 ENSFHEP00000008396 rpl8 rpl8 rpsa rpsa slc25a32 slc25a32 mrpl9 mrpl9 mrpl24 mrpl24 ENSFHEP00000009411 ENSFHEP00000009411 LOC105918212 LOC105918212 rsl24d1 rsl24d1 RPL5 RPL5 rpl10 rpl10 rps19 rps19 LOC105918681 LOC105918681 mrps21 mrps21 mrpl30 mrpl30 RPL19 RPL19 LOC105921137 LOC105921137 LOC105923102 LOC105923102 rsad1 rsad1 mrpl16 mrpl16 rps25 rps25 mrpl11 mrpl11 RPL19-2 RPL19-2 LOC105918660 LOC105918660 rpl14 rpl14 rpl39 rpl39 ENSFHEP00000032075 ENSFHEP00000032075 RPS29 RPS29 rps12 rps12 rpl15 rpl15 rps23 rps23 RPS20 RPS20 rps7 rps7 RPL30 RPL30 rps13 rps13 LOC105939592 LOC105939592 LOC105939582 LOC105939582 rpl31 rpl31 ENSFHEP00000033608 ENSFHEP00000033608 psmg1 psmg1 LOC105928521 LOC105928521 rps6 rps6 rps16 rps16 rps3 rps3 mrps14 mrps14 rpl18 rpl18 RPL3L RPL3L mrps17 mrps17 mrpl3 mrpl3 pum3 pum3 slc25a43 slc25a43 med1 med1 rps15a rps15a mrpl22 mrpl22 rps9 rps9 ENSFHEP00000015303 ENSFHEP00000015303 SLC39A11 SLC39A11 lrrc47 lrrc47 rpl23a rpl23a LOC105921030 LOC105921030 LOC105928015 LOC105928015
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSFHEP00000016354Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. (116 aa)
rpl7Ribosomal protein L7. (174 aa)
rps17Uncharacterized protein. (135 aa)
LOC105934218Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (938 aa)
rpl37aRibosomal protein L37a. (92 aa)
LOC10592482728S ribosomal protein S18c, mitochondrial-like. (128 aa)
fau40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (133 aa)
mrpl18Mitochondrial ribosomal protein L18. (212 aa)
grhl2CP2 domain-containing protein. (627 aa)
LOC105916325Ribosomal protein, large P2, like; Belongs to the eukaryotic ribosomal protein P1/P2 family. (115 aa)
rpl23Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. (126 aa)
rps4x40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (264 aa)
RPL27ARibosomal protein L27a; Belongs to the universal ribosomal protein uL15 family. (148 aa)
COPB2Coatomer_WDAD domain-containing protein. (308 aa)
ENSFHEP00000018723WD_REPEATS_REGION domain-containing protein. (194 aa)
rps2440S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (139 aa)
rpl34Ribosomal protein L34. (117 aa)
rpl35Ribosomal protein L35. (123 aa)
ENSFHEP00000020242Uncharacterized protein. (78 aa)
mrps16Mitochondrial ribosomal protein S16. (137 aa)
mrpl19Mitochondrial ribosomal protein L19. (286 aa)
mrto4Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (235 aa)
mrps15Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family. (259 aa)
lyrm9LYR motif-containing protein 9; Belongs to the complex I LYR family. (104 aa)
rpl32Ribosomal protein L32. (93 aa)
LOC105921927Uncharacterized protein. (365 aa)
ppp1r26Uncharacterized protein. (1111 aa)
rps2Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (279 aa)
etfaElectron transfer flavoprotein subunit alpha. (333 aa)
mrpl32Mitochondrial ribosomal protein L32. (183 aa)
mrps7Mitochondrial ribosomal protein S7. (229 aa)
slc25a19Solute carrier family 25 member 19; Belongs to the mitochondrial carrier (TC 2.A.29) family. (328 aa)
ENSFHEP00000022745Mitochondrial ribosomal protein L21. (204 aa)
rplp060S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (315 aa)
LOC10593682540S ribosomal protein S27. (138 aa)
rpl10aRibosomal protein; Belongs to the universal ribosomal protein uL1 family. (216 aa)
mrps12Mitochondrial ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family. (142 aa)
mrpl20Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family. (148 aa)
rpl4Ribosomal protein L4. (368 aa)
mrpl1039S ribosomal protein L10, mitochondrial. (252 aa)
rps1540S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (145 aa)
rpl1360S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (211 aa)
nsa2NSA2 ribosome biogenesis homolog (S. cerevisiae). (260 aa)
cops4COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis). (441 aa)
LOC105927697Grainyhead-like transcription factor 3. (562 aa)
mrpl28Mitochondrial ribosomal protein L28. (252 aa)
RSRC1Arginine and serine rich coiled-coil 1. (331 aa)
mrpl27Mitochondrial ribosomal protein L27. (147 aa)
REELD1Reeler domain containing 1. (505 aa)
ENSFHEP00000025244Ubiquitin-like domain-containing protein. (92 aa)
LOC105931547Ribosomal protein L26. (180 aa)
mrps5Mitochondrial ribosomal protein S5. (359 aa)
rps18Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (152 aa)
ENSFHEP00000025750Ribosomal_L18e/L15P domain-containing protein. (69 aa)
dock4Dedicator of cytokinesis 4b; Belongs to the DOCK family. (1969 aa)
mrps10Mitochondrial ribosomal protein S10. (208 aa)
rpl35aRibosomal protein L35a. (110 aa)
rps27aRibosomal protein S27a. (156 aa)
mrps11Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family. (195 aa)
ENSFHEP00000000656Uncharacterized protein. (131 aa)
veph1Ventricular zone expressed PH domain-containing 1. (829 aa)
trmt44tRNA (Uracil-O(2)-)-methyltransferase, putative. (629 aa)
mrpl1339S ribosomal protein L13, mitochondrial. (179 aa)
ENSFHEP00000001155Mitochondrial ribosomal protein S2. (242 aa)
mrpl2Mitochondrial ribosomal protein L2. (279 aa)
slc25a16Solute carrier family 25 member 16; Belongs to the mitochondrial carrier (TC 2.A.29) family. (322 aa)
rpl17Ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family. (235 aa)
RPL7ARibosomal protein L7a. (266 aa)
mrpl4Mitochondrial ribosomal protein L4. (302 aa)
LOC105939229Ribosomal protein L22. (130 aa)
cunh1orf53Si:dkey-121a9.3. (159 aa)
rps14Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (167 aa)
cetn3Centrin-3. (167 aa)
wdr46WD repeat domain 46. (567 aa)
rpl13aRibosomal protein L13a; Belongs to the universal ribosomal protein uL13 family. (205 aa)
mrpl1439S ribosomal protein L14, mitochondrial. (155 aa)
naa40N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae). (239 aa)
ENSFHEP00000004492Mitochondrial ribosomal protein S6. (122 aa)
mrpl34Mitochondrial ribosomal protein L34. (126 aa)
ENSFHEP00000004789Ribosomal_S17_N domain-containing protein. (75 aa)
rps28Ribosomal protein S28. (69 aa)
ptcd3Pentatricopeptide repeat domain 3. (665 aa)
ifi35Interferon-induced protein 35. (374 aa)
rpl2760S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (113 aa)
rpl3Ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (378 aa)
tfcp2Transcription factor CP2. (520 aa)
mrpl17Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. (165 aa)
rpl22l1Ribosomal protein L22-like 1. (131 aa)
grhl1Grainyhead-like transcription factor 1. (615 aa)
rps840S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (208 aa)
rpl37Ribosomal protein L37; Binds to the 23S rRNA. (92 aa)
rpl28Ribosomal protein L28. (169 aa)
ubp1Upstream binding protein 1. (542 aa)
LOC105935070Grainyhead-like transcription factor 2b. (578 aa)
psmd5Proteasome 26S subunit, non-ATPase 5. (504 aa)
rps2640S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (120 aa)
rps3a40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (266 aa)
LOC105936692Elongin A, like. (515 aa)
mrps9Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. (380 aa)
mrps18aMitochondrial ribosomal protein S18A. (208 aa)
mrpl35Mitochondrial ribosomal protein L35. (174 aa)
rpl18a60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (176 aa)
rpl12Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (227 aa)
ENSFHEP00000027906Mitochondrial ribosomal protein L15. (152 aa)
ccdc105Coiled-coil domain containing 105. (424 aa)
rpl7l1Ribosomal protein L7-like 1. (251 aa)
LOC10593513840S ribosomal protein S27. (95 aa)
rpl3660S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (105 aa)
mrpl1Mitochondrial ribosomal protein L1. (320 aa)
rpl24Ribosomal protein L24. (157 aa)
RPL5-2Ribosomal protein L5. (299 aa)
mrpl12Mitochondrial ribosomal protein L12. (185 aa)
LOC10591638740S ribosomal S17-like protein. (134 aa)
rpl11Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (178 aa)
LOC105929198High mobility group nucleosome binding domain 6. (66 aa)
eloaElongin A. (652 aa)
rpl2960S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (64 aa)
rps21Ribosomal protein S21. (137 aa)
LOC105938893ADP-ribosylation factor-like 6 interacting protein 1. (203 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
eedEmbryonic ectoderm development. (443 aa)
rpl21Ribosomal protein L21. (160 aa)
rps10Ribosomal protein S10. (166 aa)
rpl9Ribosomal protein L9. (193 aa)
tsen34tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...] (295 aa)
rplp1Ribosomal protein, large, P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (114 aa)
rpl38Ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family. (70 aa)
rpl6Ribosomal protein L6. (259 aa)
rps5Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (203 aa)
mrpl33Mitochondrial ribosomal protein L33. (63 aa)
ENSFHEP00000008396F-box domain-containing protein. (289 aa)
rpl8Ribosomal protein L8. (257 aa)
rpsa40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (307 aa)
slc25a32Solute carrier family 25 member 32b; Belongs to the mitochondrial carrier (TC 2.A.29) family. (325 aa)
mrpl9Mitochondrial ribosomal protein L9. (289 aa)
mrpl24Mitochondrial ribosomal protein L24; Belongs to the universal ribosomal protein uL24 family. (265 aa)
ENSFHEP00000009411Uncharacterized protein. (139 aa)
LOC105918212Mitochondrial ribosomal protein L23. (205 aa)
rsl24d1Ribosomal L24 domain containing 1. (164 aa)
RPL5Ribosomal protein L5b. (292 aa)
rpl10Ribosomal protein L10. (215 aa)
rps19Ribosomal protein S19. (146 aa)
LOC105918681Ribosomal_L18e/L15P domain-containing protein. (135 aa)
mrps21Mitochondrial ribosomal protein S21. (87 aa)
mrpl30Mitochondrial ribosomal protein L30. (188 aa)
RPL19Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (194 aa)
LOC105921137Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family. (149 aa)
LOC105923102Uncharacterized protein. (214 aa)
rsad1Radical S-adenosyl methionine domain-containing protein; May be a heme chaperone, appears to bind heme. Homologous bacterial proteins do not have oxygen-independent coproporphyrinogen- III oxidase activity. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L- methionine; Belongs to the anaerobic coproporphyrinogen-III oxidase family. (439 aa)
mrpl16Mitochondrial ribosomal protein L16. (263 aa)
rps2540S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (123 aa)
mrpl11Mitochondrial ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family. (195 aa)
RPL19-2Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (197 aa)
LOC105918660Mitochondrial ribosomal protein S18C. (135 aa)
rpl14Ribosomal protein L14. (137 aa)
rpl39Ribosomal protein L39. (51 aa)
ENSFHEP0000003207560S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (64 aa)
RPS29Ribosomal protein S29. (66 aa)
rps1240S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (211 aa)
rpl15Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
rps23Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (147 aa)
RPS20Ribosomal protein S20. (119 aa)
rps740S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (170 aa)
RPL30Ribosomal protein L30. (95 aa)
rps13Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (108 aa)
LOC105939592G protein-coupled receptor 108. (571 aa)
LOC105939582Heme-binding protein soul5, like. (349 aa)
rpl31Ribosomal protein L31. (124 aa)
ENSFHEP00000033608Uncharacterized protein. (77 aa)
psmg1Uncharacterized protein. (280 aa)
LOC10592852140S ribosomal protein S27. (133 aa)
rps640S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
rps16Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (146 aa)
rps3Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (245 aa)
mrps14Mitochondrial ribosomal protein S14. (149 aa)
rpl18Ribosomal protein L18. (190 aa)
RPL3LRibosomal protein L3 like. (329 aa)
mrps17Mitochondrial ribosomal protein S17. (145 aa)
mrpl3Mitochondrial ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (342 aa)
pum3Pumilio RNA-binding family member 3. (526 aa)
slc25a43Solute carrier family 25 member 43; Belongs to the mitochondrial carrier (TC 2.A.29) family. (345 aa)
med1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1792 aa)
rps15aRibosomal protein S15a; Belongs to the universal ribosomal protein uS8 family. (153 aa)
mrpl2239S ribosomal protein L22, mitochondrial; Belongs to the universal ribosomal protein uL22 family. (209 aa)
rps9Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (194 aa)
ENSFHEP0000001530340S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (110 aa)
SLC39A11Solute carrier family 39 member 11. (332 aa)
lrrc47Leucine rich repeat containing 47. (495 aa)
rpl23aRibosomal protein L23a; Belongs to the universal ribosomal protein uL23 family. (155 aa)
LOC105921030Uncharacterized protein. (130 aa)
LOC10592801560S acidic ribosomal protein P2; Belongs to the eukaryotic ribosomal protein P1/P2 family. (115 aa)
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
Server load: low (16%) [HD]