STRINGSTRING
TMEM87B TMEM87B pan2 pan2 ENSFHEP00000024237 ENSFHEP00000024237 cct7 cct7 edc4 edc4 btg1 btg1 bbs10 bbs10 LOC105917901 LOC105917901 LOC105927090 LOC105927090 LOC105939781 LOC105939781 LOC105924674 LOC105924674 tent4a tent4a LOC105918082 LOC105918082 ttc37 ttc37 LOC105939783 LOC105939783 slc30a7 slc30a7 ENSFHEP00000022200 ENSFHEP00000022200 exosc10 exosc10 cnot10 cnot10 LOC105934107 LOC105934107 ENSFHEP00000001286 ENSFHEP00000001286 ENSFHEP00000001290 ENSFHEP00000001290 LOC105920252 LOC105920252 cnot3 cnot3 dcp1a dcp1a dhx29 dhx29 cct6a cct6a mkks mkks dcps dcps ppic ppic dis3 dis3 ddx6 ddx6 LOC105920302 LOC105920302 cnot1 cnot1 dis3l2 dis3l2 LOC105927995 LOC105927995 exosc2 exosc2 exosc6 exosc6 nudt6 nudt6 pan3 pan3 cnot8 cnot8 btg3 btg3 LOC105939439 LOC105939439 dhx30 dhx30 LOC105931483 LOC105931483 LOC105916727 LOC105916727 parn parn LOC105930941 LOC105930941 ENSFHEP00000028655 ENSFHEP00000028655 ENSFHEP00000028581 ENSFHEP00000028581 ENSFHEP00000028461 ENSFHEP00000028461 eno2 eno2 zcchc9 zcchc9 LOC105937892 LOC105937892 TMEM87A TMEM87A c1d c1d dcp2 dcp2 LOC105916085 LOC105916085 lsm2 lsm2 LOC105917730 LOC105917730 dhx57 dhx57 exosc1 exosc1 ENSFHEP00000026267 ENSFHEP00000026267 skiv2l skiv2l LOC105937172 LOC105937172 ENSFHEP00000025877 ENSFHEP00000025877 LOC105928581 LOC105928581 hspa9 hspa9 cnot4 cnot4 PNPT1 PNPT1 lsm7 lsm7 cunh19orf54 cunh19orf54 LOC105927738 LOC105927738 dis3l dis3l ENSFHEP00000021864 ENSFHEP00000021864 exosc8 exosc8 cnot9 cnot9 tcp1 tcp1 mtrex mtrex ufsp2 ufsp2 exosc5 exosc5 toe1 toe1 yjefn3 yjefn3 cct4 cct4 cnbp cnbp dph1 dph1 LSM5 LSM5 LOC105931761 LOC105931761 ipo8 ipo8 noct noct slc30a5 slc30a5 eno1 eno1 nudt18 nudt18 pabpc4 pabpc4 ipo7 ipo7 LOC105930003 LOC105930003 lsm6 lsm6 LOC105935109 LOC105935109 ENSFHEP00000007214 ENSFHEP00000007214 ENSFHEP00000007314 ENSFHEP00000007314 LOC105917796 LOC105917796 exosc3 exosc3 edc3 edc3 lsm1 lsm1 exosc7 exosc7 zcchc7 zcchc7 LOC105920039 LOC105920039 slc30a6 slc30a6 exd2 exd2 lsm3 lsm3 lrrc27 lrrc27 TOB2 TOB2 ENSFHEP00000018461 ENSFHEP00000018461 dcp1b dcp1b mphosph6 mphosph6 LOC105916480 LOC105916480 pam pam ENSFHEP00000010750 ENSFHEP00000010750 LOC105932765 LOC105932765 cnot6l cnot6l tent4b tent4b LOC105930455 LOC105930455 ENSFHEP00000011546 ENSFHEP00000011546 ENSFHEP00000011888 ENSFHEP00000011888 cct2 cct2 exosc4 exosc4 ENSFHEP00000012151 ENSFHEP00000012151 LOC105937045 LOC105937045 lsm8 lsm8 hspd1 hspd1 LOC105915242 LOC105915242 plxdc2 plxdc2 LOC105933285 LOC105933285 LOC105916922 LOC105916922 LOC105929201 LOC105929201 LOC105932691 LOC105932691 ENSFHEP00000014232 ENSFHEP00000014232 LOC105925034 LOC105925034 ENSFHEP00000014582 ENSFHEP00000014582 ENSFHEP00000014705 ENSFHEP00000014705 naxe naxe LSM4 LSM4 cct3 cct3 cbwd1 cbwd1 ENSFHEP00000015614 ENSFHEP00000015614 ENSFHEP00000015621 ENSFHEP00000015621 LOC105926354 LOC105926354 ppp4r2 ppp4r2 dhx36 dhx36 wdr61 wdr61 cct5 cct5 pabpc1 pabpc1 pde12 pde12 LOC105927396 LOC105927396 ppib ppib
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TMEM87BTransmembrane protein 87B. (564 aa)
pan2Poly(A) specific ribonuclease subunit PAN2. (1130 aa)
ENSFHEP00000024237B-cell translocation gene 4. (208 aa)
cct7T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin. (444 aa)
edc4Enhancer of mRNA decapping 4. (1132 aa)
btg1B-cell translocation gene 1, anti-proliferative. (180 aa)
bbs10Uncharacterized protein. (660 aa)
LOC105917901Uncharacterized protein. (197 aa)
LOC105927090Poly(A) binding protein, cytoplasmic 1-like. (644 aa)
LOC105939781Uncharacterized protein. (247 aa)
LOC105924674Uncharacterized protein. (375 aa)
tent4aTerminal nucleotidyltransferase 4A. (824 aa)
LOC105918082PAT1 homolog 1, processing body mRNA decay factor. (800 aa)
ttc37Tetratricopeptide repeat domain 37. (1546 aa)
LOC105939783Uncharacterized protein. (209 aa)
slc30a7Solute carrier family 30 member 7. (405 aa)
ENSFHEP00000022200FAM161 centrosomal protein A. (602 aa)
exosc10Exosome component 10. (889 aa)
cnot10CCR4-NOT transcription complex, subunit 10. (743 aa)
LOC105934107CCR4-NOT transcription complex, subunit 3b. (931 aa)
ENSFHEP00000001286Enolase_N domain-containing protein. (83 aa)
ENSFHEP00000001290Enolase 2. (191 aa)
LOC105920252Si:ch211-106h4.6. (535 aa)
cnot3CCR4-NOT transcription complex, subunit 3a. (887 aa)
dcp1aDecapping mRNA 1A. (480 aa)
dhx29ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily. (1389 aa)
cct6aChaperonin containing TCP1, subunit 6A (zeta 1). (531 aa)
mkksMcKusick-Kaufman/Bardet-Biedl syndromes chaperonin, putative. (614 aa)
dcpsDecapping enzyme, scavenger. (330 aa)
ppicPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (208 aa)
dis3DIS3 exosome endoribonuclease and 3'-5' exoribonuclease. (549 aa)
ddx6DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family. (482 aa)
LOC105920302Uncharacterized protein. (95 aa)
cnot1CCR4-NOT transcription complex, subunit 1. (2378 aa)
dis3l2DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of both mRNAs and miRNAs that have been polyuridylated by a terminal uridylyltransferase. Essential for correct mitosis, and negatively regulates cell proliferation. Belongs to the RNR ribonuclease family. DIS3L2 subfamily. (1071 aa)
LOC105927995ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily. (788 aa)
exosc2Exosome component 2. (298 aa)
exosc6Exosome component 6. (276 aa)
nudt6Nudix (nucleoside diphosphate linked moiety X)-type motif 6. (306 aa)
pan3PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] (664 aa)
cnot8CCR4-NOT transcription complex, subunit 8. (285 aa)
btg3B-cell translocation gene 3. (235 aa)
LOC105939439Transducer of ERBB2, 1a. (338 aa)
dhx30DEAH (Asp-Glu-Ala-His) box helicase 30. (1132 aa)
LOC105931483Nocturnin. (387 aa)
LOC105916727CCR4-NOT transcription complex, subunit 6a. (391 aa)
parnPoly(A)-specific ribonuclease (deadenylation nuclease). (639 aa)
LOC105930941Phosphofructokinase, platelet b. (753 aa)
ENSFHEP00000028655XRN_M domain-containing protein. (519 aa)
ENSFHEP00000028581WD repeat containing, antisense to TP73. (420 aa)
ENSFHEP00000028461UFM1-specific peptidase 1 (non-functional). (232 aa)
eno2Uncharacterized protein. (391 aa)
zcchc9Zinc finger CCHC domain-containing protein 9. (272 aa)
LOC105937892Plexin domain-containing protein 1. (482 aa)
TMEM87ATransmembrane protein 87A. (434 aa)
c1dC1D nuclear receptor corepressor. (154 aa)
dcp2Decapping mRNA 2. (397 aa)
LOC105916085PAT1 homolog 2. (495 aa)
lsm2U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
LOC105917730CCR4-NOT transcription complex, subunit 2. (528 aa)
dhx57DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57. (1429 aa)
exosc1Exosome component 1. (194 aa)
ENSFHEP00000026267Uncharacterized protein. (333 aa)
skiv2lSKI2 homolog, superkiller viralicidic activity 2-like. (1246 aa)
LOC105937172ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily. (780 aa)
ENSFHEP00000025877CCHC-type domain-containing protein. (128 aa)
LOC105928581Uncharacterized protein. (457 aa)
hspa9Heat shock protein 9; Belongs to the heat shock protein 70 family. (734 aa)
cnot4CCR4-NOT transcription complex, subunit 4a. (806 aa)
PNPT1Polyribonucleotide nucleotidyltransferase 1. (770 aa)
lsm7LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated. (112 aa)
cunh19orf54Zgc:153119. (298 aa)
LOC105927738Uncharacterized protein. (849 aa)
dis3lDIS3 like exosome 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family. (1046 aa)
ENSFHEP00000021864Uncharacterized protein. (172 aa)
exosc8Exosome component 8. (277 aa)
cnot9CCR4-NOT transcription complex subunit 9. (268 aa)
tcp1T-complex 1. (558 aa)
mtrexMtr4 exosome RNA helicase. (1115 aa)
ufsp2Ufm1-specific peptidase 2. (466 aa)
exosc5Exosome component 5. (236 aa)
toe1Target of EGR1, exonuclease. (520 aa)
yjefn3YjeF N-terminal domain containing 3. (249 aa)
cct4T-complex protein 1 subunit delta. (535 aa)
cnbpCCHC-type zinc finger, nucleic acid binding protein a. (166 aa)
dph12-(3-amino-3-carboxypropyl)histidine synthase subunit 1; Required for the first step of diphthamide biosynthesis, the transfer of 3-amino-3-carboxypropyl from S-adenosyl-L-methionine to a histidine residue. Diphthamide is a post-translational modification of histidine which occurs in elongation factor 2. (359 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (89 aa)
LOC105931761ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily. (808 aa)
ipo8Importin 8. (1016 aa)
noctNocturnin. (460 aa)
slc30a5Solute carrier family 30 member 5. (777 aa)
eno1Enolase 1a, (alpha). (473 aa)
nudt18Nudix hydrolase domain-containing protein; Belongs to the Nudix hydrolase family. (133 aa)
pabpc4Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (626 aa)
ipo7Importin 7. (1009 aa)
LOC105930003Uncharacterized protein. (216 aa)
lsm6LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated. (80 aa)
LOC105935109Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (634 aa)
ENSFHEP00000007214Vacuolar protein sorting 72 homolog a. (315 aa)
ENSFHEP00000007314Uncharacterized protein. (235 aa)
LOC105917796Ankyrin repeat and KH domain containing 1. (2494 aa)
exosc3Exosome component 3. (301 aa)
edc3Enhancer of mRNA decapping 3 homolog (S. cerevisiae). (478 aa)
lsm1U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. (133 aa)
exosc7Exosome component 7. (291 aa)
zcchc7Zinc finger, CCHC domain containing 7. (479 aa)
LOC105920039Si:dkey-79d12.5. (278 aa)
slc30a6Solute carrier family 30 member 6. (434 aa)
exd2Exonuclease 3'-5' domain containing 2. (639 aa)
lsm3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
lrrc27Leucine-rich repeat-containing protein 27. (411 aa)
TOB2Transducer of ERBB2, 2. (399 aa)
ENSFHEP00000018461Uncharacterized protein. (110 aa)
dcp1bDecapping mRNA 1B. (636 aa)
mphosph6M-phase phosphoprotein 6. (163 aa)
LOC105916480PSI domain-containing protein. (241 aa)
pamPeptidylglycine alpha-amidating monooxygenase. (882 aa)
ENSFHEP00000010750Uncharacterized protein. (158 aa)
LOC105932765Uncharacterized protein. (201 aa)
cnot6lCCR4-NOT transcription complex, subunit 6-like. (549 aa)
tent4bNon-canonical poly(A) RNA polymerase PAPD5. (680 aa)
LOC105930455NOT2_3_5 domain-containing protein. (528 aa)
ENSFHEP000000115465'-3' exoribonuclease 2. (508 aa)
ENSFHEP00000011888RNase_PH domain-containing protein. (115 aa)
cct2Chaperonin containing TCP1, subunit 2 (beta). (488 aa)
exosc4Exosome component 4. (245 aa)
ENSFHEP00000012151Enolase_C domain-containing protein. (487 aa)
LOC105937045ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily. (842 aa)
lsm8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
hspd1Heat shock 60 protein 1; Belongs to the chaperonin (HSP60) family. (578 aa)
LOC105915242Zgc:103759. (246 aa)
plxdc2Plexin domain containing 2. (483 aa)
LOC105933285Enolase 1b, (alpha). (434 aa)
LOC105916922Uncharacterized protein; Belongs to the DEAD box helicase family. (482 aa)
LOC105929201CCR4-NOT transcription complex, subunit 7. (304 aa)
LOC105932691Cellular nucleic acid-binding protein. (486 aa)
ENSFHEP00000014232Uncharacterized protein. (167 aa)
LOC1059250342-(3-amino-3-carboxypropyl)histidine synthase subunit 2; Required for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in translation elongation factor 2. (392 aa)
ENSFHEP00000014582Uncharacterized protein. (338 aa)
ENSFHEP00000014705Uncharacterized protein. (125 aa)
naxeNAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX. (281 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (59 aa)
cct3T-complex protein 1 subunit gamma. (540 aa)
cbwd1COBW domain containing. (371 aa)
ENSFHEP00000015614XRN_N domain-containing protein. (103 aa)
ENSFHEP00000015621Uncharacterized protein. (457 aa)
LOC105926354Si:dkey-12j5.1. (421 aa)
ppp4r2Serine/threonine-protein phosphatase 4 regulatory subunit 2. (423 aa)
dhx36DEAH (Asp-Glu-Ala-His) box polypeptide 36. (1013 aa)
wdr61WD repeat domain 61. (305 aa)
cct5Chaperonin containing TCP1, subunit 5 (epsilon). (554 aa)
pabpc1Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (635 aa)
pde12Phosphodiesterase 12. (630 aa)
LOC105927396Transducer of ERBB2, 1b. (333 aa)
ppibPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (216 aa)
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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