16 items (Fundulus heteroclitus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSFHEP00000025245	Chromo domain-containing protein. (82 aa)
	cbx5	Chromobox homolog 5 (HP1 alpha homolog, Drosophila). (230 aa)
	fnbp1	Formin binding protein 1b. (505 aa)
	LOC105933038	Tectonin beta-propeller repeat containing 1b. (1181 aa)
	ENSFHEP00000006322	Uncharacterized protein. (201 aa)
	tnip1	TNFAIP3-interacting protein 1. (694 aa)
	fnbp1l	Formin binding protein 1-like. (558 aa)
	CAPNS1	Calpain small subunit 1. (216 aa)
	ENSFHEP00000021136	Si:ch211-15b10.6. (195 aa)
	LOC105930119	Calpain, small subunit 1 b. (216 aa)
	CBX1	Chromobox homolog 1b (HP1 beta homolog Drosophila). (189 aa)
	LOC105925539	Si:ch211-15b10.6. (187 aa)
	cast	Calpastatin. (892 aa)
	coq9	Ubiquinone biosynthesis protein; Lipid-binding protein involved in the biosynthesis of coenzyme Q, also named ubiquinone, an essential lipid-soluble electron transporter for aerobic cellular respiration. (327 aa)
	LOC105934310	Chromobox homolog 3a (HP1 gamma homolog, Drosophila). (173 aa)
	LOC105917127	F-BAR domain-containing protein. (326 aa)

Your Current Organism:

Fundulus heteroclitus

NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAPNS1	cast	ENSFHEP00000010777	ENSFHEP00000034900	Calpain small subunit 1.	Calpastatin.	0.939
LOC105917127	fnbp1l	ENSFHEP00000025466	ENSFHEP00000008569	F-BAR domain-containing protein.	Formin binding protein 1-like.	0.659
LOC105930119	cast	ENSFHEP00000023558	ENSFHEP00000034900	Calpain, small subunit 1 b.	Calpastatin.	0.939
cast	CAPNS1	ENSFHEP00000034900	ENSFHEP00000010777	Calpastatin.	Calpain small subunit 1.	0.939
cast	LOC105930119	ENSFHEP00000034900	ENSFHEP00000023558	Calpastatin.	Calpain, small subunit 1 b.	0.939
fnbp1	fnbp1l	ENSFHEP00000001038	ENSFHEP00000008569	Formin binding protein 1b.	Formin binding protein 1-like.	0.658
fnbp1l	LOC105917127	ENSFHEP00000008569	ENSFHEP00000025466	Formin binding protein 1-like.	F-BAR domain-containing protein.	0.659
fnbp1l	fnbp1	ENSFHEP00000008569	ENSFHEP00000001038	Formin binding protein 1-like.	Formin binding protein 1b.	0.658