(15 nodes) Mixed, incl. PR-DUB complex, and NADH regeneration network (Poecilia reticulata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	foxk1	Forkhead box K1. (564 aa)
	LOC103480785	Si:dkey-183c6.8. (802 aa)
	LOC103460654	Forkhead box K2. (736 aa)
	foxi3	Forkhead box I2. (400 aa)
	ogt	O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1. (1039 aa)
	ENSPREP00000012507	HARE-HTH domain-containing protein. (100 aa)
	bap1	Ubiquitin carboxyl-terminal hydrolase. (727 aa)
	LOC103471654	Si:ch211-145o7.3. (321 aa)
	ENSPREP00000018826	Fibronectin type-III domain-containing protein. (255 aa)
	Asxl2	HARE-HTH domain-containing protein. (85 aa)
	Hcfc2	Host cell factor C2. (270 aa)
	foxk2	Uncharacterized protein. (635 aa)
	eogt	EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase. (526 aa)
	foxn3	Checkpoint suppressor 1. (483 aa)
	mbd5	Methyl-CpG binding domain protein 5. (1408 aa)

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Asxl2	ENSPREP00000018826	ENSPREP00000021093	ENSPREP00000018826	HARE-HTH domain-containing protein.	Fibronectin type-III domain-containing protein.	0.718
Asxl2	Hcfc2	ENSPREP00000021093	ENSPREP00000023589	HARE-HTH domain-containing protein.	Host cell factor C2.	0.718
Asxl2	LOC103460654	ENSPREP00000021093	ENSPREP00000007894	HARE-HTH domain-containing protein.	Forkhead box K2.	0.714
Asxl2	bap1	ENSPREP00000021093	ENSPREP00000012646	HARE-HTH domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase.	0.994
Asxl2	foxk1	ENSPREP00000021093	ENSPREP00000000023	HARE-HTH domain-containing protein.	Forkhead box K1.	0.714
Asxl2	foxk2	ENSPREP00000021093	ENSPREP00000026017	HARE-HTH domain-containing protein.	Uncharacterized protein.	0.714
Asxl2	mbd5	ENSPREP00000021093	ENSPREP00000032596	HARE-HTH domain-containing protein.	Methyl-CpG binding domain protein 5.	0.785
Asxl2	ogt	ENSPREP00000021093	ENSPREP00000010451	HARE-HTH domain-containing protein.	O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1.	0.860
ENSPREP00000012507	ENSPREP00000018826	ENSPREP00000012507	ENSPREP00000018826	HARE-HTH domain-containing protein.	Fibronectin type-III domain-containing protein.	0.576
ENSPREP00000012507	Hcfc2	ENSPREP00000012507	ENSPREP00000023589	HARE-HTH domain-containing protein.	Host cell factor C2.	0.576
ENSPREP00000012507	LOC103460654	ENSPREP00000012507	ENSPREP00000007894	HARE-HTH domain-containing protein.	Forkhead box K2.	0.635
ENSPREP00000012507	bap1	ENSPREP00000012507	ENSPREP00000012646	HARE-HTH domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase.	0.959
ENSPREP00000012507	foxk1	ENSPREP00000012507	ENSPREP00000000023	HARE-HTH domain-containing protein.	Forkhead box K1.	0.635
ENSPREP00000012507	foxk2	ENSPREP00000012507	ENSPREP00000026017	HARE-HTH domain-containing protein.	Uncharacterized protein.	0.635
ENSPREP00000012507	mbd5	ENSPREP00000012507	ENSPREP00000032596	HARE-HTH domain-containing protein.	Methyl-CpG binding domain protein 5.	0.550
ENSPREP00000012507	ogt	ENSPREP00000012507	ENSPREP00000010451	HARE-HTH domain-containing protein.	O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1.	0.756
ENSPREP00000018826	Asxl2	ENSPREP00000018826	ENSPREP00000021093	Fibronectin type-III domain-containing protein.	HARE-HTH domain-containing protein.	0.718
ENSPREP00000018826	ENSPREP00000012507	ENSPREP00000018826	ENSPREP00000012507	Fibronectin type-III domain-containing protein.	HARE-HTH domain-containing protein.	0.576
ENSPREP00000018826	Hcfc2	ENSPREP00000018826	ENSPREP00000023589	Fibronectin type-III domain-containing protein.	Host cell factor C2.	0.933
ENSPREP00000018826	LOC103460654	ENSPREP00000018826	ENSPREP00000007894	Fibronectin type-III domain-containing protein.	Forkhead box K2.	0.553