(11 nodes) Mixed, incl. RNA import into nucleus, and RanGAP1 C-terminal domain network (Poecilia reticulata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	adgrd1	Adhesion G protein-coupled receptor D1; Belongs to the G-protein coupled receptor 2 family. (853 aa)
	rcc1	Regulator of chromosome condensation 1. (417 aa)
	kpnb1	Karyopherin (importin) beta 1. (876 aa)
	snupn	Snurportin 1. (376 aa)
	ran	GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (218 aa)
	rangap1	RAN GTPase activating protein 1a. (575 aa)
	xpo5	Exportin 5. (1172 aa)
	xpot	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family. (951 aa)
	ranbp1	RAN binding protein 1. (205 aa)
	LOC103481999	Ran GTPase activating protein 1b. (567 aa)
	adgrb2	Adhesion G protein-coupled receptor B2; Belongs to the G-protein coupled receptor 2 family. (1595 aa)

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103481999	adgrb2	ENSPREP00000030639	ENSPREP00000031234	Ran GTPase activating protein 1b.	Adhesion G protein-coupled receptor B2; Belongs to the G-protein coupled receptor 2 family.	0.788
LOC103481999	adgrd1	ENSPREP00000030639	ENSPREP00000002470	Ran GTPase activating protein 1b.	Adhesion G protein-coupled receptor D1; Belongs to the G-protein coupled receptor 2 family.	0.941
LOC103481999	kpnb1	ENSPREP00000030639	ENSPREP00000018146	Ran GTPase activating protein 1b.	Karyopherin (importin) beta 1.	0.717
LOC103481999	ran	ENSPREP00000030639	ENSPREP00000025717	Ran GTPase activating protein 1b.	GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.941
LOC103481999	ranbp1	ENSPREP00000030639	ENSPREP00000028001	Ran GTPase activating protein 1b.	RAN binding protein 1.	0.968
LOC103481999	rangap1	ENSPREP00000030639	ENSPREP00000026307	Ran GTPase activating protein 1b.	RAN GTPase activating protein 1a.	0.902
LOC103481999	rcc1	ENSPREP00000030639	ENSPREP00000012389	Ran GTPase activating protein 1b.	Regulator of chromosome condensation 1.	0.850
LOC103481999	snupn	ENSPREP00000030639	ENSPREP00000018742	Ran GTPase activating protein 1b.	Snurportin 1.	0.408
LOC103481999	xpo5	ENSPREP00000030639	ENSPREP00000026654	Ran GTPase activating protein 1b.	Exportin 5.	0.638
LOC103481999	xpot	ENSPREP00000030639	ENSPREP00000027409	Ran GTPase activating protein 1b.	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.	0.478
adgrb2	LOC103481999	ENSPREP00000031234	ENSPREP00000030639	Adhesion G protein-coupled receptor B2; Belongs to the G-protein coupled receptor 2 family.	Ran GTPase activating protein 1b.	0.788
adgrb2	kpnb1	ENSPREP00000031234	ENSPREP00000018146	Adhesion G protein-coupled receptor B2; Belongs to the G-protein coupled receptor 2 family.	Karyopherin (importin) beta 1.	0.860
adgrb2	ranbp1	ENSPREP00000031234	ENSPREP00000028001	Adhesion G protein-coupled receptor B2; Belongs to the G-protein coupled receptor 2 family.	RAN binding protein 1.	0.731
adgrb2	rangap1	ENSPREP00000031234	ENSPREP00000026307	Adhesion G protein-coupled receptor B2; Belongs to the G-protein coupled receptor 2 family.	RAN GTPase activating protein 1a.	0.788
adgrb2	rcc1	ENSPREP00000031234	ENSPREP00000012389	Adhesion G protein-coupled receptor B2; Belongs to the G-protein coupled receptor 2 family.	Regulator of chromosome condensation 1.	0.450
adgrb2	snupn	ENSPREP00000031234	ENSPREP00000018742	Adhesion G protein-coupled receptor B2; Belongs to the G-protein coupled receptor 2 family.	Snurportin 1.	0.496
adgrb2	xpo5	ENSPREP00000031234	ENSPREP00000026654	Adhesion G protein-coupled receptor B2; Belongs to the G-protein coupled receptor 2 family.	Exportin 5.	0.593
adgrb2	xpot	ENSPREP00000031234	ENSPREP00000027409	Adhesion G protein-coupled receptor B2; Belongs to the G-protein coupled receptor 2 family.	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.	0.763
adgrd1	LOC103481999	ENSPREP00000002470	ENSPREP00000030639	Adhesion G protein-coupled receptor D1; Belongs to the G-protein coupled receptor 2 family.	Ran GTPase activating protein 1b.	0.941
adgrd1	kpnb1	ENSPREP00000002470	ENSPREP00000018146	Adhesion G protein-coupled receptor D1; Belongs to the G-protein coupled receptor 2 family.	Karyopherin (importin) beta 1.	0.976