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cdk13 cdk13 polr2c polr2c srbd1 srbd1 eaf2 eaf2 aff1 aff1 polr2i polr2i mllt3 mllt3 cinp cinp LOC103462177 LOC103462177 aff4 aff4 cdc73 cdc73 ENSPREP00000009060 ENSPREP00000009060 LOC103466632 LOC103466632 ENSPREP00000009702 ENSPREP00000009702 supt5h supt5h polr2h polr2h sidt2 sidt2 IWS1 IWS1 Cdk9 Cdk9 supt4h1 supt4h1 eloa eloa ENSPREP00000012074 ENSPREP00000012074 LOC103478445 LOC103478445 mllt1 mllt1 ice2 ice2 supt16h supt16h ell ell supt6h supt6h LOC103458470 LOC103458470 paf1 paf1 cdk12 cdk12 polr2b polr2b polr2a polr2a eepd1 eepd1 LOC103468483 LOC103468483 ELOF1 ELOF1 polr2j polr2j ENSPREP00000023662 ENSPREP00000023662 tcea1 tcea1 ccnt2 ccnt2 polr2g polr2g ccnk ccnk ssrp1 ssrp1 leo1 leo1 rtf1 rtf1 eaf1 eaf1 LOC103467918 LOC103467918 ccnt1 ccnt1 ENSPREP00000029347 ENSPREP00000029347 ell2 ell2 polr2d polr2d ENSPREP00000032704 ENSPREP00000032704 ctr9 ctr9
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cdk13Cyclin-dependent kinase 13. (1409 aa)
polr2cPolymerase (RNA) II (DNA directed) polypeptide C. (273 aa)
srbd1S1 RNA binding domain 1. (983 aa)
eaf2ELL associated factor 2. (255 aa)
aff1Uncharacterized protein. (1096 aa)
polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
mllt3MLLT3 super elongation complex subunit. (507 aa)
cinpCyclin-dependent kinase 2 interacting protein. (209 aa)
LOC103462177Uncharacterized protein. (662 aa)
aff4AF4/FMR2 family, member 4. (1106 aa)
cdc73Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae). (576 aa)
ENSPREP00000009060Uncharacterized protein. (134 aa)
LOC103466632Si:ch211-13k12.2. (602 aa)
ENSPREP00000009702Uncharacterized protein. (132 aa)
supt5hTranscription elongation factor SPT5. (1059 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
sidt2SID1 transmembrane family, member 2. (872 aa)
IWS1Interacts with SUPT6H, CTD assembly factor 1. (766 aa)
Cdk9Cyclin-dependent kinase 9 (CDC2-related kinase). (552 aa)
supt4h1SPT4 homolog, DSIF elongation factor subunit. (174 aa)
eloaElongin A. (681 aa)
ENSPREP00000012074CYCLIN domain-containing protein; Belongs to the cyclin family. (177 aa)
LOC103478445Transcription elongation factor A (SII), 3. (562 aa)
mllt1MLLT1 super elongation complex subunit a. (586 aa)
ice2Interactor of little elongator complex ELL subunit 2. (907 aa)
supt16hSPT16 homolog, facilitates chromatin remodeling subunit. (1077 aa)
ellElongation factor RNA polymerase II. (611 aa)
supt6hTranscription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1825 aa)
LOC103458470Uncharacterized protein. (627 aa)
paf1PAF1 homolog, Paf1/RNA polymerase II complex component. (531 aa)
cdk12Cyclin-dependent kinase 12. (1352 aa)
polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1966 aa)
eepd1Endonuclease/exonuclease/phosphatase family domain containing 1. (555 aa)
LOC103468483Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (83 aa)
ELOF1Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (83 aa)
polr2jPolymerase (RNA) II (DNA directed) polypeptide J. (117 aa)
ENSPREP00000023662Uncharacterized protein. (169 aa)
tcea1Transcription elongation factor A (SII), 1. (320 aa)
ccnt2Cyclin T2; Belongs to the cyclin family. (687 aa)
polr2gPolymerase (RNA) II (DNA directed) polypeptide G-like. (172 aa)
ccnkCyclin K; Belongs to the cyclin family. (541 aa)
ssrp1FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (730 aa)
leo1LEO1 homolog, Paf1/RNA polymerase II complex component. (631 aa)
rtf1RTF1 homolog, Paf1/RNA polymerase II complex component. (663 aa)
eaf1EAF domain-containing protein. (282 aa)
LOC103467918Transcription elongation factor A (SII), 2. (369 aa)
ccnt1Cyclin T1; Belongs to the cyclin family. (189 aa)
ENSPREP00000029347Uncharacterized protein. (179 aa)
ell2Elongation factor, RNA polymerase II, 2. (670 aa)
polr2dPolymerase (RNA) II (DNA directed) polypeptide D. (104 aa)
ENSPREP00000032704TFIIS N-terminal domain-containing protein. (269 aa)
ctr9CTR9 homolog, Paf1/RNA polymerase II complex component. (1154 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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