18 items (Poecilia reticulata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	plxna1	Sema domain-containing protein. (1891 aa)
	LOC103466867	Plexin A1a. (1881 aa)
	ENSPREP00000003007	Plexin_cytopl domain-containing protein. (255 aa)
	sema3b	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B; Belongs to the semaphorin family. (809 aa)
	nrp1	Neuropilin; Belongs to the neuropilin family. (903 aa)
	ENSPREP00000014353	Semaphorin 7A; Belongs to the semaphorin family. (366 aa)
	LOC103475124	Sema domain-containing protein. (1092 aa)
	ENSPREP00000019059	Sema domain-containing protein. (485 aa)
	ENSPREP00000019123	Uncharacterized protein. (295 aa)
	LOC103479279	Semaphorin 4e; Belongs to the semaphorin family. (759 aa)
	sema6a	Semaphorin 6A; Belongs to the semaphorin family. (1011 aa)
	sema3a	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab; Belongs to the semaphorin family. (799 aa)
	ENSPREP00000020773	Sema domain-containing protein. (427 aa)
	sema5a	Sema domain-containing protein. (1153 aa)
	Plxnd1	Sema domain-containing protein. (627 aa)
	LOC103461156	Plexin_cytopl domain-containing protein. (238 aa)
	ENSPREP00000023646	Plexin_cytopl domain-containing protein. (267 aa)
	LOC103467959	Plexin A2. (1163 aa)

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPREP00000003007	ENSPREP00000014353	ENSPREP00000003007	ENSPREP00000014353	Plexin_cytopl domain-containing protein.	Semaphorin 7A; Belongs to the semaphorin family.	0.562
ENSPREP00000003007	ENSPREP00000019059	ENSPREP00000003007	ENSPREP00000019059	Plexin_cytopl domain-containing protein.	Sema domain-containing protein.	0.912
ENSPREP00000003007	ENSPREP00000020773	ENSPREP00000003007	ENSPREP00000020773	Plexin_cytopl domain-containing protein.	Sema domain-containing protein.	0.900
ENSPREP00000003007	LOC103467959	ENSPREP00000003007	ENSPREP00000033140	Plexin_cytopl domain-containing protein.	Plexin A2.	0.899
ENSPREP00000003007	LOC103475124	ENSPREP00000003007	ENSPREP00000017601	Plexin_cytopl domain-containing protein.	Sema domain-containing protein.	0.443
ENSPREP00000003007	LOC103479279	ENSPREP00000003007	ENSPREP00000019651	Plexin_cytopl domain-containing protein.	Semaphorin 4e; Belongs to the semaphorin family.	0.468
ENSPREP00000003007	Plxnd1	ENSPREP00000003007	ENSPREP00000023108	Plexin_cytopl domain-containing protein.	Sema domain-containing protein.	0.880
ENSPREP00000003007	nrp1	ENSPREP00000003007	ENSPREP00000008824	Plexin_cytopl domain-containing protein.	Neuropilin; Belongs to the neuropilin family.	0.678
ENSPREP00000003007	sema3a	ENSPREP00000003007	ENSPREP00000020694	Plexin_cytopl domain-containing protein.	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab; Belongs to the semaphorin family.	0.537
ENSPREP00000003007	sema3b	ENSPREP00000003007	ENSPREP00000005839	Plexin_cytopl domain-containing protein.	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B; Belongs to the semaphorin family.	0.611
ENSPREP00000003007	sema5a	ENSPREP00000003007	ENSPREP00000020825	Plexin_cytopl domain-containing protein.	Sema domain-containing protein.	0.469
ENSPREP00000003007	sema6a	ENSPREP00000003007	ENSPREP00000020591	Plexin_cytopl domain-containing protein.	Semaphorin 6A; Belongs to the semaphorin family.	0.497
ENSPREP00000014353	ENSPREP00000003007	ENSPREP00000014353	ENSPREP00000003007	Semaphorin 7A; Belongs to the semaphorin family.	Plexin_cytopl domain-containing protein.	0.562
ENSPREP00000014353	ENSPREP00000019059	ENSPREP00000014353	ENSPREP00000019059	Semaphorin 7A; Belongs to the semaphorin family.	Sema domain-containing protein.	0.579
ENSPREP00000014353	ENSPREP00000020773	ENSPREP00000014353	ENSPREP00000020773	Semaphorin 7A; Belongs to the semaphorin family.	Sema domain-containing protein.	0.562
ENSPREP00000014353	ENSPREP00000023646	ENSPREP00000014353	ENSPREP00000023646	Semaphorin 7A; Belongs to the semaphorin family.	Plexin_cytopl domain-containing protein.	0.703
ENSPREP00000014353	LOC103461156	ENSPREP00000014353	ENSPREP00000023186	Semaphorin 7A; Belongs to the semaphorin family.	Plexin_cytopl domain-containing protein.	0.562
ENSPREP00000014353	LOC103466867	ENSPREP00000014353	ENSPREP00000002538	Semaphorin 7A; Belongs to the semaphorin family.	Plexin A1a.	0.562
ENSPREP00000014353	LOC103467959	ENSPREP00000014353	ENSPREP00000033140	Semaphorin 7A; Belongs to the semaphorin family.	Plexin A2.	0.562
ENSPREP00000014353	Plxnd1	ENSPREP00000014353	ENSPREP00000023108	Semaphorin 7A; Belongs to the semaphorin family.	Sema domain-containing protein.	0.562