STRINGSTRING
stx10 stx10 smim7 smim7 rps6kc1 rps6kc1 rab33b rab33b vti1a vti1a ENSPREP00000001234 ENSPREP00000001234 stx18 stx18 cog4 cog4 trappc2 trappc2 uso1 uso1 LOC103463837 LOC103463837 cog3 cog3 ENSPREP00000003185 ENSPREP00000003185 ENSPREP00000003373 ENSPREP00000003373 bet1 bet1 LOC103479611 LOC103479611 vps50 vps50 LOC103478960 LOC103478960 sec22a sec22a LOC103471023 LOC103471023 trappc12 trappc12 eipr1 eipr1 LOC103458105 LOC103458105 ENSPREP00000004967 ENSPREP00000004967 LOC103459897 LOC103459897 LOC103480121 LOC103480121 rgp1 rgp1 trappc4 trappc4 rab3gap1 rab3gap1 ENSPREP00000005683 ENSPREP00000005683 rab3gap2 rab3gap2 trappc10 trappc10 LOC103476592 LOC103476592 LOC103471994 LOC103471994 LOC103467065 LOC103467065 vps51 vps51 stx6 stx6 rab18 rab18 ENSPREP00000009513 ENSPREP00000009513 LOC103479084 LOC103479084 LOC103479386 LOC103479386 ENSPREP00000010354 ENSPREP00000010354 ENSPREP00000011081 ENSPREP00000011081 filip1l filip1l cog8 cog8 LOC103475664 LOC103475664 tbc1d22a tbc1d22a trappc1 trappc1 LOC103475643 LOC103475643 gosr2 gosr2 tbc1d25 tbc1d25 vti1b vti1b LOC103463624 LOC103463624 tbc1d20 tbc1d20 RAB41 RAB41 ENSPREP00000014829 ENSPREP00000014829 LOC103459027 LOC103459027 LOC103458463 LOC103458463 ykt6 ykt6 tsnare1 tsnare1 snap29 snap29 LOC103457654 LOC103457654 cog2 cog2 arl13a arl13a cog1 cog1 rundc1 rundc1 LOC103459440 LOC103459440 nbas nbas nsf nsf LOC103472476 LOC103472476 ptar1 ptar1 LOC103481708 LOC103481708 COG5 COG5 LOC103457041 LOC103457041 GCC2 GCC2 sys1 sys1 arl1 arl1 stx7 stx7 stx16 stx16 TRAPPC5 TRAPPC5 LOC103471972 LOC103471972 LOC103462855 LOC103462855 cog6 cog6 rabl6 rabl6 RIC1 RIC1 rab30 rab30 trappc9 trappc9 stx5 stx5 ENSPREP00000022754 ENSPREP00000022754 ENSPREP00000022850 ENSPREP00000022850 plekha1 plekha1 LOC103469118 LOC103469118 LOC103461168 LOC103461168 garem2 garem2 LOC103463948 LOC103463948 golga2 golga2 napa napa LOC103457862 LOC103457862 stx8 stx8 use1 use1 LOC103459724 LOC103459724 zw10 zw10 napg napg LOC103475093 LOC103475093 rint1 rint1 LOC103473265 LOC103473265 tmf1 tmf1 rabggtb rabggtb stx17 stx17 FILIP1L FILIP1L cog7 cog7 LOC103464057 LOC103464057 LOC103470871 LOC103470871 rps6ka1 rps6ka1 arfrp1 arfrp1 LOC103458514 LOC103458514 trappc13 trappc13 trappc8 trappc8 rab1a rab1a vps54 vps54 rabggta rabggta sec22c sec22c LOC103467862 LOC103467862 trappc6a trappc6a vps53 vps53 trappc3 trappc3 rab6a rab6a gosr1 gosr1 vps52 vps52 trappc11 trappc11 FIGNL2 FIGNL2 trappc2l trappc2l ccdc186 ccdc186 fam189a1 fam189a1 golga4 golga4 cgnl1 cgnl1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
stx10Syntaxin 10. (284 aa)
smim7Small integral membrane protein 7. (75 aa)
rps6kc1Ribosomal protein S6 kinase polypeptide 1. (1143 aa)
rab33bRAB33B, member RAS oncogene family a. (236 aa)
vti1aVesicle transport through interaction with t-SNAREs 1A. (224 aa)
ENSPREP00000001234Vesicle-associated membrane protein 4. (117 aa)
stx18Syntaxin 18. (338 aa)
cog4Component of oligomeric golgi complex 4. (773 aa)
trappc2Trafficking protein particle complex 2. (141 aa)
uso1USO1 vesicle transport factor. (948 aa)
LOC103463837Uncharacterized protein. (296 aa)
cog3Component of oligomeric golgi complex 3. (833 aa)
ENSPREP00000003185Uncharacterized protein. (211 aa)
ENSPREP00000003373Uncharacterized protein. (72 aa)
bet1Bet1 golgi vesicular membrane trafficking protein. (112 aa)
LOC103479611RAB6B, member RAS oncogene family. (208 aa)
vps50VPS50 EARP/GARPII complex subunit. (992 aa)
LOC103478960RAB18B, member RAS oncogene family. (181 aa)
sec22aSEC22 homolog A, vesicle trafficking protein; Belongs to the synaptobrevin family. (303 aa)
LOC103471023RAB33A, member RAS oncogene family. (342 aa)
trappc12Trafficking protein particle complex 12. (816 aa)
eipr1EARP complex and GARP complex interacting protein 1. (387 aa)
LOC103458105Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family. (533 aa)
ENSPREP00000004967Uncharacterized protein. (84 aa)
LOC103459897Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. (550 aa)
LOC103480121ZRAB1B, member RAS oncogene family a. (201 aa)
rgp1GP1 homolog, RAB6A GEF complex partner 1. (386 aa)
trappc4Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (219 aa)
rab3gap1RAB3 GTPase activating protein subunit 1. (1009 aa)
ENSPREP00000005683Uncharacterized protein. (343 aa)
rab3gap2RAB3 GTPase activating protein subunit 2 (non-catalytic). (1373 aa)
trappc10Trafficking protein particle complex 10. (837 aa)
LOC103476592Uncharacterized protein. (295 aa)
LOC103471994RAB1A, member RAS oncogene family a. (209 aa)
LOC103467065TBC1 domain family, member 22B. (374 aa)
vps51VPS51 subunit of GARP complex. (826 aa)
stx6Syntaxin 6; Belongs to the syntaxin family. (255 aa)
rab18RAB18A, member RAS oncogene family. (246 aa)
ENSPREP00000009513t-SNARE coiled-coil homology domain-containing protein. (205 aa)
LOC103479084SEC22 homolog B, vesicle trafficking protein a; Belongs to the synaptobrevin family. (215 aa)
LOC103479386Zgc:101559. (234 aa)
ENSPREP00000010354Bet1 golgi vesicular membrane trafficking protein-like. (60 aa)
ENSPREP00000011081Nuclear apoptosis inducing factor 1. (324 aa)
filip1lUncharacterized protein. (731 aa)
cog8Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family. (625 aa)
LOC103475664BCL2 interacting protein 1b. (230 aa)
tbc1d22aTBC1 domain family, member 22a. (588 aa)
trappc1Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (145 aa)
LOC103475643Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. (248 aa)
gosr2Golgi SNAP receptor complex member 2; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network. (212 aa)
tbc1d25TBC1 domain family, member 25. (846 aa)
vti1bVesicle transport through interaction with t-SNAREs 1B. (159 aa)
LOC103463624SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family. (220 aa)
tbc1d20TBC1 domain family, member 20. (397 aa)
RAB41RAB41, member RAS oncogene family. (211 aa)
ENSPREP00000014829Uncharacterized protein. (235 aa)
LOC103459027Zgc:163014. (563 aa)
LOC103458463RAB GTPase activating protein 1-like 2. (299 aa)
ykt6YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family. (198 aa)
tsnare1Si:ch211-208k15.1; Belongs to the syntaxin family. (287 aa)
snap29Synaptosome associated protein 29. (258 aa)
LOC103457654Lebercilin LCA5. (811 aa)
cog2Component of oligomeric golgi complex 2. (742 aa)
arl13aADP-ribosylation factor-like 13A. (443 aa)
cog1Component of oligomeric golgi complex 1. (988 aa)
rundc1RUN domain containing 1. (566 aa)
LOC103459440Uncharacterized protein. (223 aa)
nbasNeuroblastoma amplified sequence. (2365 aa)
nsfN-ethylmaleimide-sensitive factor a. (754 aa)
LOC103472476Zgc:63863. (364 aa)
ptar1Protein prenyltransferase alpha subunit repeat containing 1. (451 aa)
LOC103481708N-ethylmaleimide-sensitive factor b; Belongs to the AAA ATPase family. (693 aa)
COG5Component of oligomeric golgi complex 5. (779 aa)
LOC103457041Filamin A interacting protein 1b. (1134 aa)
GCC2GRIP domain-containing protein. (1646 aa)
sys1Protein SYS1 homolog; Involved in protein trafficking. Belongs to the SYS1 family. (155 aa)
arl1ADP-ribosylation factor-like 1; Belongs to the small GTPase superfamily. Arf family. (187 aa)
stx7Syntaxin 7-like; Belongs to the syntaxin family. (255 aa)
stx16Syntaxin 16; Belongs to the syntaxin family. (303 aa)
TRAPPC5Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi. (188 aa)
LOC103471972RAB42, member RAS oncogene family a. (218 aa)
LOC103462855Ribosomal protein S6 kinase. (792 aa)
cog6Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. (651 aa)
rabl6RAB, member RAS oncogene family-like 6b. (741 aa)
RIC1RIC1 homolog, RAB6A GEF complex partner 1. (1154 aa)
rab30RAB30, member RAS oncogene family. (203 aa)
trappc9Trafficking protein particle complex 9. (1092 aa)
stx5Syntaxin 5A; Belongs to the syntaxin family. (330 aa)
ENSPREP00000022754Vesicle-associated membrane protein 8 (endobrevin). (118 aa)
ENSPREP00000022850V-SNARE coiled-coil homology domain-containing protein. (110 aa)
plekha1Pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1b. (333 aa)
LOC103469118Uncharacterized protein. (233 aa)
LOC103461168Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. (443 aa)
garem2GRB2 associated, regulator of MAPK1-like. (723 aa)
LOC103463948RAB6B, member RAS oncogene family a. (235 aa)
golga2Golgin A2. (980 aa)
napaN-ethylmaleimide-sensitive factor attachment protein, alpha b. (278 aa)
LOC103457862N-ethylmaleimide-sensitive factor attachment protein, beta b. (256 aa)
stx8Syntaxin 8. (332 aa)
use1Unconventional SNARE in the ER 1 homolog (S. cerevisiae). (255 aa)
LOC103459724Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. (450 aa)
zw10Zw10 kinetochore protein. (767 aa)
napgN-ethylmaleimide-sensitive factor attachment protein, gamma b. (313 aa)
LOC103475093Zgc:171927. (214 aa)
rint1RAD50 interactor 1. (787 aa)
LOC103473265Si:ch73-234b20.5. (147 aa)
tmf1TATA element modulatory factor 1. (1150 aa)
rabggtbGeranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (312 aa)
stx17t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (304 aa)
FILIP1LFilamin A interacting protein 1 like. (1222 aa)
cog7Component of oligomeric golgi complex 7. (767 aa)
LOC103464057Sec1 family domain containing 2; Belongs to the STXBP/unc-18/SEC1 family. (641 aa)
LOC103470871BCL2 interacting protein 1a. (276 aa)
rps6ka1Ribosomal protein S6 kinase. (735 aa)
arfrp1ADP-ribosylation factor related protein 1. (240 aa)
LOC103458514RAB15, member RAS oncogene family. (210 aa)
trappc13Trafficking protein particle complex 13. (388 aa)
trappc8Trafficking protein particle complex 8. (1454 aa)
rab1aUncharacterized protein. (203 aa)
vps54VPS54 subunit of GARP complex. (1027 aa)
rabggtaRab geranylgeranyltransferase subunit alpha. (585 aa)
sec22cSEC22 homolog C, vesicle trafficking protein; Belongs to the synaptobrevin family. (312 aa)
LOC103467862Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. (447 aa)
trappc6aTrafficking protein particle complex 6b-like. (192 aa)
vps53VPS53 subunit of GARP complex. (832 aa)
trappc3Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi. (180 aa)
rab6aRAB6A, member RAS oncogene family. (208 aa)
gosr1Golgi SNAP receptor complex member 1. (252 aa)
vps52VPS52 subunit of GARP complex. (574 aa)
trappc11Trafficking protein particle complex 11. (1123 aa)
FIGNL2Fidgetin like 2. (677 aa)
trappc2lTrafficking protein particle complex 2-like. (140 aa)
ccdc186Si:ch211-225b10.4. (996 aa)
fam189a1Family with sequence similarity 189 member A1. (532 aa)
golga4Golgin A4. (1963 aa)
cgnl1Cingulin-like 1. (1279 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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