(28 nodes) Mixed, incl. GABA receptor binding, and Detection of mechanical stimulus involved in sensory perception of sound network (Poecilia reticulata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Cdh23	Uncharacterized protein. (1041 aa)
	LOC103465658	Uncharacterized protein. (574 aa)
	ENSPREP00000002838	LHFPL tetraspan subfamily member 4a. (217 aa)
	LOC103464905	LHFPL tetraspan subfamily member 5a. (224 aa)
	adgrv1	Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family. (6188 aa)
	anks4b	Ankyrin repeat and sterile alpha motif domain containing 4B. (430 aa)
	tmie	Transmembrane inner ear. (229 aa)
	CIB2	Calcium and integrin binding family member 2. (173 aa)
	ush1g	Usher syndrome 1Gb (autosomal recessive). (477 aa)
	TMC1	Transmembrane channel-like protein. (901 aa)
	LOC103461672	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2095 aa)
	LOC103470576	Transmembrane channel-like protein. (876 aa)
	LOC103466575	Calcium and integrin binding family member 2. (187 aa)
	PDZD7	PDZ domain containing 7. (804 aa)
	cib3	Calcium and integrin binding family member 3. (187 aa)
	Zpr1	ZPR1 zinc finger. (446 aa)
	LOC103476307	Myosin VIIAb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2194 aa)
	pcdh15	Protocadherin-related 15a. (1922 aa)
	myo7b	Si:ch73-194h10.2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2175 aa)
	LOC103466396	Uncharacterized protein. (226 aa)
	LOC103476869	PDZ domain containing 7a. (961 aa)
	cdhr2	Uncharacterized protein. (1303 aa)
	ENSPREP00000029886	Transmembrane channel-like protein. (789 aa)
	ush1c	Usher syndrome 1C. (553 aa)
	LOC103475259	Clarin 1. (200 aa)
	Lhfpl3	LHFPL tetraspan subfamily member 3. (226 aa)
	lhfpl5	LHFPL tetraspan subfamily member 5b. (218 aa)
	LOC103481331	Uncharacterized protein. (1418 aa)

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CIB2	ENSPREP00000002838	ENSPREP00000011140	ENSPREP00000002838	Calcium and integrin binding family member 2.	LHFPL tetraspan subfamily member 4a.	0.468
CIB2	LOC103464905	ENSPREP00000011140	ENSPREP00000003603	Calcium and integrin binding family member 2.	LHFPL tetraspan subfamily member 5a.	0.472
CIB2	LOC103466396	ENSPREP00000011140	ENSPREP00000024329	Calcium and integrin binding family member 2.	Uncharacterized protein.	0.490
CIB2	Lhfpl3	ENSPREP00000011140	ENSPREP00000032646	Calcium and integrin binding family member 2.	LHFPL tetraspan subfamily member 3.	0.472
CIB2	PDZD7	ENSPREP00000011140	ENSPREP00000016302	Calcium and integrin binding family member 2.	PDZ domain containing 7.	0.664
CIB2	TMC1	ENSPREP00000011140	ENSPREP00000013428	Calcium and integrin binding family member 2.	Transmembrane channel-like protein.	0.913
CIB2	lhfpl5	ENSPREP00000011140	ENSPREP00000033589	Calcium and integrin binding family member 2.	LHFPL tetraspan subfamily member 5b.	0.472
CIB2	tmie	ENSPREP00000011140	ENSPREP00000010972	Calcium and integrin binding family member 2.	Transmembrane inner ear.	0.537
CIB2	ush1c	ENSPREP00000011140	ENSPREP00000030327	Calcium and integrin binding family member 2.	Usher syndrome 1C.	0.495
Cdh23	LOC103464905	ENSPREP00000001649	ENSPREP00000003603	Uncharacterized protein.	LHFPL tetraspan subfamily member 5a.	0.400
Cdh23	LOC103465658	ENSPREP00000001649	ENSPREP00000002030	Uncharacterized protein.	Uncharacterized protein.	0.831
Cdh23	LOC103475259	ENSPREP00000001649	ENSPREP00000032120	Uncharacterized protein.	Clarin 1.	0.556
Cdh23	LOC103476307	ENSPREP00000001649	ENSPREP00000021928	Uncharacterized protein.	Myosin VIIAb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.440
Cdh23	LOC103476869	ENSPREP00000001649	ENSPREP00000026922	Uncharacterized protein.	PDZ domain containing 7a.	0.417
Cdh23	LOC103481331	ENSPREP00000001649	ENSPREP00000033674	Uncharacterized protein.	Uncharacterized protein.	0.844
Cdh23	PDZD7	ENSPREP00000001649	ENSPREP00000016302	Uncharacterized protein.	PDZ domain containing 7.	0.417
Cdh23	TMC1	ENSPREP00000001649	ENSPREP00000013428	Uncharacterized protein.	Transmembrane channel-like protein.	0.552
Cdh23	adgrv1	ENSPREP00000001649	ENSPREP00000008279	Uncharacterized protein.	Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family.	0.549
Cdh23	lhfpl5	ENSPREP00000001649	ENSPREP00000033589	Uncharacterized protein.	LHFPL tetraspan subfamily member 5b.	0.400
Cdh23	pcdh15	ENSPREP00000001649	ENSPREP00000022296	Uncharacterized protein.	Protocadherin-related 15a.	0.844