STRINGSTRING
LOC103466236 LOC103466236 rnf213 rnf213 ENSPREP00000004459 ENSPREP00000004459 ENSPREP00000009629 ENSPREP00000009629 LOC103472377 LOC103472377 ifih1 ifih1 LOC103477270 LOC103477270 ENSPREP00000011628 ENSPREP00000011628 LOC103477355 LOC103477355 LOC103468247 LOC103468247 xaf1 xaf1 dhx58 dhx58 LOC103463314 LOC103463314 ENSPREP00000017493 ENSPREP00000017493 LOC103463495 LOC103463495 LOC103463313 LOC103463313 LOC103465032 LOC103465032 LOC103465031 LOC103465031 LOC103465029 LOC103465029 rsad2 rsad2 pex26 pex26
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103466236HECT domain-containing protein. (1004 aa)
rnf213Ring finger protein 213a. (4763 aa)
ENSPREP00000004459Uncharacterized protein. (181 aa)
ENSPREP00000009629TLDc domain-containing protein. (196 aa)
LOC103472377zf-3CxxC domain-containing protein. (172 aa)
ifih1Interferon induced with helicase C domain 1. (969 aa)
LOC103477270Uncharacterized protein. (689 aa)
ENSPREP00000011628Uncharacterized protein. (564 aa)
LOC103477355Protein kinase domain-containing protein. (582 aa)
LOC103468247TLDc domain-containing protein. (444 aa)
xaf1XIAP associated factor 1. (267 aa)
dhx58DEXH (Asp-Glu-X-His) box polypeptide 58. (681 aa)
LOC103463314G domain-containing protein. (480 aa)
ENSPREP00000017493TLDc domain-containing protein. (383 aa)
LOC103463495G domain-containing protein. (278 aa)
LOC103463313TLDc domain-containing protein. (464 aa)
LOC103465032Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (636 aa)
LOC103465031Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (646 aa)
LOC103465029Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (618 aa)
rsad2Radical S-adenosyl methionine domain containing 2. (350 aa)
pex26Ubiquitin specific peptidase 18; Belongs to the peptidase C19 family. (317 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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