STRINGSTRING
LOC103472858 LOC103472858 LOC103472243 LOC103472243 LOC103464572 LOC103464572 LOC103464571 LOC103464571 rcvrn rcvrn LOC103460589 LOC103460589 gnat1 gnat1 LOC103464516 LOC103464516 grk7 grk7 LOC103478050 LOC103478050 gnb1 gnb1 LOC103467179 LOC103467179 rho rho LOC103474448 LOC103474448 grk1 grk1 LOC103475792 LOC103475792
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103472858Recoverin 3. (192 aa)
LOC103472243Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (73 aa)
LOC103464572Rhodopsin. (345 aa)
LOC103464571Rhodopsin. (362 aa)
rcvrnRecoverin a. (203 aa)
LOC103460589S-antigen; retina and pineal gland (arrestin) a. (398 aa)
gnat1Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1. (350 aa)
LOC103464516Guanine nucleotide binding protein (G protein), beta polypeptide 1b. (340 aa)
grk7G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (557 aa)
LOC103478050Recoverin 2. (193 aa)
gnb1Guanine nucleotide binding protein (G protein), beta polypeptide 1a. (340 aa)
LOC103467179Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2. (350 aa)
rhoRhodopsin; Photoreceptor required for image-forming vision at low light intensity. While most salt water fish species use retinal as chromophore, most freshwater fish use 3-dehydroretinal, or a mixture of retinal and 3-dehydroretinal (By similarity). Light-induced isomerization of 11-cis to all-trans retinal triggers a conformational change that activates signaling via G-proteins. Subsequent receptor phosphorylation mediates displacement of the bound G-protein alpha subunit by arrestin and terminates signaling (By similarity). (350 aa)
LOC103474448G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (545 aa)
grk1G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (563 aa)
LOC103475792G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (559 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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