(15 nodes) Mixed, incl. Galectin-like, and Regulation of regulatory T cell differentiation network (Poecilia reticulata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSPREP00000000253	Ig-like domain-containing protein. (145 aa)
	LOC103468616	Galectin. (176 aa)
	cd276	CD276 molecule. (298 aa)
	LOC103461379	Galectin. (233 aa)
	ENSPREP00000010806	Galectin. (325 aa)
	ENSPREP00000013399	Uncharacterized protein. (453 aa)
	LOC103478004	Uncharacterized protein. (346 aa)
	ptprc	Protein tyrosine phosphatase receptor type C. (1230 aa)
	LOC103464847	Ig-like domain-containing protein. (288 aa)
	LOC103477886	Si:dkey-24p1.1. (1021 aa)
	LOC103457880	Galectin. (300 aa)
	ENSPREP00000024881	IGv domain-containing protein. (230 aa)
	LGALS2	Galectin. (140 aa)
	LOC103458310	Galectin. (351 aa)
	Spdl1	Uncharacterized protein. (62 aa)

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPREP00000000253	ptprc	ENSPREP00000000253	ENSPREP00000018309	Ig-like domain-containing protein.	Protein tyrosine phosphatase receptor type C.	0.909
ENSPREP00000010806	ENSPREP00000013399	ENSPREP00000010806	ENSPREP00000013399	Galectin.	Uncharacterized protein.	0.491
ENSPREP00000010806	ENSPREP00000024881	ENSPREP00000010806	ENSPREP00000024881	Galectin.	IGv domain-containing protein.	0.543
ENSPREP00000010806	LOC103461379	ENSPREP00000010806	ENSPREP00000008682	Galectin.	Galectin.	0.429
ENSPREP00000010806	LOC103478004	ENSPREP00000010806	ENSPREP00000016299	Galectin.	Uncharacterized protein.	0.663
ENSPREP00000010806	ptprc	ENSPREP00000010806	ENSPREP00000018309	Galectin.	Protein tyrosine phosphatase receptor type C.	0.591
ENSPREP00000013399	ENSPREP00000010806	ENSPREP00000013399	ENSPREP00000010806	Uncharacterized protein.	Galectin.	0.491
ENSPREP00000013399	ENSPREP00000024881	ENSPREP00000013399	ENSPREP00000024881	Uncharacterized protein.	IGv domain-containing protein.	0.584
ENSPREP00000013399	LOC103464847	ENSPREP00000013399	ENSPREP00000022439	Uncharacterized protein.	Ig-like domain-containing protein.	0.900
ENSPREP00000013399	LOC103478004	ENSPREP00000013399	ENSPREP00000016299	Uncharacterized protein.	Uncharacterized protein.	0.645
ENSPREP00000013399	Spdl1	ENSPREP00000013399	ENSPREP00000033006	Uncharacterized protein.	Uncharacterized protein.	0.451
ENSPREP00000013399	ptprc	ENSPREP00000013399	ENSPREP00000018309	Uncharacterized protein.	Protein tyrosine phosphatase receptor type C.	0.478
ENSPREP00000024881	ENSPREP00000010806	ENSPREP00000024881	ENSPREP00000010806	IGv domain-containing protein.	Galectin.	0.543
ENSPREP00000024881	ENSPREP00000013399	ENSPREP00000024881	ENSPREP00000013399	IGv domain-containing protein.	Uncharacterized protein.	0.584
ENSPREP00000024881	LOC103478004	ENSPREP00000024881	ENSPREP00000016299	IGv domain-containing protein.	Uncharacterized protein.	0.612
ENSPREP00000024881	cd276	ENSPREP00000024881	ENSPREP00000008587	IGv domain-containing protein.	CD276 molecule.	0.694
ENSPREP00000024881	ptprc	ENSPREP00000024881	ENSPREP00000018309	IGv domain-containing protein.	Protein tyrosine phosphatase receptor type C.	0.401
LGALS2	ptprc	ENSPREP00000025641	ENSPREP00000018309	Galectin.	Protein tyrosine phosphatase receptor type C.	0.444
LOC103457880	LOC103478004	ENSPREP00000023571	ENSPREP00000016299	Galectin.	Uncharacterized protein.	0.458
LOC103457880	ptprc	ENSPREP00000023571	ENSPREP00000018309	Galectin.	Protein tyrosine phosphatase receptor type C.	0.432