(10 nodes) dGTP binding, and Ribonuclease H2 complex network (Poecilia reticulata)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CPNE3-2	Copine 3. (527 aa)
	rnaseh2b	Ribonuclease H2, subunit B. (306 aa)
	LOC103464804	LisH domain-containing protein. (1582 aa)
	rnaseh2a	Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. (296 aa)
	rnaseh2c	Ribonuclease H2, subunit C. (202 aa)
	DCAF1	DDB1 and CUL4 associated factor 1. (1356 aa)
	LOC103467464	HD domain-containing protein. (433 aa)
	LOC103467467	SAM domain and HD domain 1. (627 aa)
	ENSPREP00000027416	HD domain-containing protein. (178 aa)
	ung	Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. (303 aa)

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CPNE3-2	rnaseh2a	ENSPREP00000010673	ENSPREP00000022242	Copine 3.	Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.	0.463
CPNE3-2	rnaseh2b	ENSPREP00000010673	ENSPREP00000011344	Copine 3.	Ribonuclease H2, subunit B.	0.508
DCAF1	ENSPREP00000027416	ENSPREP00000025564	ENSPREP00000027416	DDB1 and CUL4 associated factor 1.	HD domain-containing protein.	0.707
DCAF1	LOC103467464	ENSPREP00000025564	ENSPREP00000027347	DDB1 and CUL4 associated factor 1.	HD domain-containing protein.	0.707
DCAF1	LOC103467467	ENSPREP00000025564	ENSPREP00000027383	DDB1 and CUL4 associated factor 1.	SAM domain and HD domain 1.	0.707
DCAF1	ung	ENSPREP00000025564	ENSPREP00000032770	DDB1 and CUL4 associated factor 1.	Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.	0.862
ENSPREP00000027416	DCAF1	ENSPREP00000027416	ENSPREP00000025564	HD domain-containing protein.	DDB1 and CUL4 associated factor 1.	0.707
ENSPREP00000027416	LOC103464804	ENSPREP00000027416	ENSPREP00000022084	HD domain-containing protein.	LisH domain-containing protein.	0.707
ENSPREP00000027416	rnaseh2a	ENSPREP00000027416	ENSPREP00000022242	HD domain-containing protein.	Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.	0.414
ENSPREP00000027416	rnaseh2b	ENSPREP00000027416	ENSPREP00000011344	HD domain-containing protein.	Ribonuclease H2, subunit B.	0.405
ENSPREP00000027416	rnaseh2c	ENSPREP00000027416	ENSPREP00000022779	HD domain-containing protein.	Ribonuclease H2, subunit C.	0.408
LOC103464804	ENSPREP00000027416	ENSPREP00000022084	ENSPREP00000027416	LisH domain-containing protein.	HD domain-containing protein.	0.707
LOC103464804	LOC103467464	ENSPREP00000022084	ENSPREP00000027347	LisH domain-containing protein.	HD domain-containing protein.	0.707
LOC103464804	LOC103467467	ENSPREP00000022084	ENSPREP00000027383	LisH domain-containing protein.	SAM domain and HD domain 1.	0.707
LOC103464804	ung	ENSPREP00000022084	ENSPREP00000032770	LisH domain-containing protein.	Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.	0.862
LOC103467464	DCAF1	ENSPREP00000027347	ENSPREP00000025564	HD domain-containing protein.	DDB1 and CUL4 associated factor 1.	0.707
LOC103467464	LOC103464804	ENSPREP00000027347	ENSPREP00000022084	HD domain-containing protein.	LisH domain-containing protein.	0.707
LOC103467464	rnaseh2a	ENSPREP00000027347	ENSPREP00000022242	HD domain-containing protein.	Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.	0.414
LOC103467464	rnaseh2b	ENSPREP00000027347	ENSPREP00000011344	HD domain-containing protein.	Ribonuclease H2, subunit B.	0.405
LOC103467464	rnaseh2c	ENSPREP00000027347	ENSPREP00000022779	HD domain-containing protein.	Ribonuclease H2, subunit C.	0.408