(31 nodes) Mixed, incl. Dystrophin-associated glycoprotein complex, and EF hand network (Poecilia reticulata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SGCZ	Sarcoglycan zeta. (287 aa)
	utrn	Uncharacterized protein. (972 aa)
	sgcg	Sarcoglycan, gamma. (306 aa)
	ENSPREP00000005618	Uncharacterized protein. (1359 aa)
	ENSPREP00000005674	Uncharacterized protein. (502 aa)
	LOC103479031	Nitric oxide synthase 1 (neuronal) adaptor protein b. (502 aa)
	sntg1	Syntrophin, gamma 1. (525 aa)
	ENSPREP00000013027	Dystrobrevin, alpha. (555 aa)
	plgrkt	Plasminogen receptor, C-terminal lysine transmembrane protein. (167 aa)
	sntb1	Syntrophin, basic 1. (539 aa)
	ENSPREP00000014893	Sarcoglycan, alpha. (347 aa)
	ENSPREP00000015287	Uncharacterized protein. (324 aa)
	Clg4h1orf226	Uncharacterized protein. (181 aa)
	nos1ap	PID domain-containing protein. (329 aa)
	ENSPREP00000016012	Uncharacterized protein. (300 aa)
	LOC103463578	Uncharacterized protein. (375 aa)
	drp2	Dystrophin related protein 2. (877 aa)
	rft1	Protein RFT1 homolog; May be involved in N-linked oligosaccharide assembly. Belongs to the RFT1 family. (537 aa)
	sgcd	Sarcoglycan, delta (dystrophin-associated glycoprotein). (379 aa)
	dtnb	Dystrobrevin. (600 aa)
	LOC103476834	Uncharacterized protein. (745 aa)
	LOC103479308	Olfactomedin-like domain-containing protein. (729 aa)
	dmd	Dystrophin. (1180 aa)
	LOC103457276	Dystrobrevin. (564 aa)
	LOC103480654	Uncharacterized protein. (311 aa)
	sspn	Sarcospan (Kras oncogene-associated gene). (224 aa)
	tor3a	Torsin family 3, member A. (367 aa)
	sgcb	Sarcoglycan, beta (dystrophin-associated glycoprotein). (311 aa)
	LOC103473375	Torsin. (331 aa)
	LOC103473376	Torsin. (329 aa)
	LOC103473406	Si:dkey-34e4.1. (663 aa)

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Clg4h1orf226	ENSPREP00000005618	ENSPREP00000015320	ENSPREP00000005618	Uncharacterized protein.	Uncharacterized protein.	0.435
Clg4h1orf226	ENSPREP00000005674	ENSPREP00000015320	ENSPREP00000005674	Uncharacterized protein.	Uncharacterized protein.	0.435
Clg4h1orf226	ENSPREP00000013027	ENSPREP00000015320	ENSPREP00000013027	Uncharacterized protein.	Dystrobrevin, alpha.	0.468
Clg4h1orf226	ENSPREP00000016012	ENSPREP00000015320	ENSPREP00000016012	Uncharacterized protein.	Uncharacterized protein.	0.548
Clg4h1orf226	LOC103457276	ENSPREP00000015320	ENSPREP00000024211	Uncharacterized protein.	Dystrobrevin.	0.468
Clg4h1orf226	LOC103463578	ENSPREP00000015320	ENSPREP00000016025	Uncharacterized protein.	Uncharacterized protein.	0.548
Clg4h1orf226	LOC103476834	ENSPREP00000015320	ENSPREP00000021270	Uncharacterized protein.	Uncharacterized protein.	0.435
Clg4h1orf226	dmd	ENSPREP00000015320	ENSPREP00000021787	Uncharacterized protein.	Dystrophin.	0.435
Clg4h1orf226	drp2	ENSPREP00000015320	ENSPREP00000016814	Uncharacterized protein.	Dystrophin related protein 2.	0.435
Clg4h1orf226	dtnb	ENSPREP00000015320	ENSPREP00000021131	Uncharacterized protein.	Dystrobrevin.	0.468
Clg4h1orf226	nos1ap	ENSPREP00000015320	ENSPREP00000015334	Uncharacterized protein.	PID domain-containing protein.	0.651
Clg4h1orf226	plgrkt	ENSPREP00000015320	ENSPREP00000013361	Uncharacterized protein.	Plasminogen receptor, C-terminal lysine transmembrane protein.	0.469
Clg4h1orf226	sntb1	ENSPREP00000015320	ENSPREP00000014775	Uncharacterized protein.	Syntrophin, basic 1.	0.479
Clg4h1orf226	utrn	ENSPREP00000015320	ENSPREP00000005306	Uncharacterized protein.	Uncharacterized protein.	0.435
ENSPREP00000005618	Clg4h1orf226	ENSPREP00000005618	ENSPREP00000015320	Uncharacterized protein.	Uncharacterized protein.	0.435
ENSPREP00000005618	ENSPREP00000005674	ENSPREP00000005618	ENSPREP00000005674	Uncharacterized protein.	Uncharacterized protein.	0.899
ENSPREP00000005618	ENSPREP00000013027	ENSPREP00000005618	ENSPREP00000013027	Uncharacterized protein.	Dystrobrevin, alpha.	0.448
ENSPREP00000005618	LOC103457276	ENSPREP00000005618	ENSPREP00000024211	Uncharacterized protein.	Dystrobrevin.	0.426
ENSPREP00000005618	LOC103473406	ENSPREP00000005618	ENSPREP00000032207	Uncharacterized protein.	Si:dkey-34e4.1.	0.435
ENSPREP00000005618	LOC103479031	ENSPREP00000005618	ENSPREP00000008094	Uncharacterized protein.	Nitric oxide synthase 1 (neuronal) adaptor protein b.	0.435