(18 nodes) Homologous chromosome pairing at meiosis, and Synaptonemal complex protein 2-like network (Poecilia reticulata)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TMC6	Transmembrane channel-like protein. (717 aa)
	LOC103464578	Synaptonemal complex central element protein 2. (186 aa)
	ogfod1	2-oxoglutarate and iron-dependent oxygenase domain containing 1. (459 aa)
	ccnb1ip1	Cyclin B1 interacting protein 1. (239 aa)
	spata22	Spermatogenesis associated 22. (382 aa)
	shoc1	Uncharacterized protein. (1440 aa)
	spo11	SPO11 initiator of meiotic double stranded breaks. (379 aa)
	tcte1	T-complex-associated-testis-expressed 1. (487 aa)
	tex11	Testis expressed 11. (770 aa)
	LOC103460156	SYCP2_SLD domain-containing protein. (696 aa)
	terb1	Telomere repeat binding bouquet formation protein 1. (804 aa)
	Mei1	Uncharacterized protein. (321 aa)
	sycp2	Uncharacterized protein. (1567 aa)
	hormad1	HORMA domain containing 1. (372 aa)
	sycp3	Synaptonemal complex protein 3. (245 aa)
	Syce3	Uncharacterized protein. (81 aa)
	majin	Membrane anchored junction protein. (217 aa)
	terb2	Telomere repeat binding bouquet formation protein 2. (222 aa)

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103460156	shoc1	ENSPREP00000015357	ENSPREP00000010006	SYCP2_SLD domain-containing protein.	Uncharacterized protein.	0.419
LOC103460156	sycp3	ENSPREP00000015357	ENSPREP00000029907	SYCP2_SLD domain-containing protein.	Synaptonemal complex protein 3.	0.541
LOC103464578	Mei1	ENSPREP00000000695	ENSPREP00000024676	Synaptonemal complex central element protein 2.	Uncharacterized protein.	0.418
LOC103464578	Syce3	ENSPREP00000000695	ENSPREP00000030075	Synaptonemal complex central element protein 2.	Uncharacterized protein.	0.854
LOC103464578	hormad1	ENSPREP00000000695	ENSPREP00000028947	Synaptonemal complex central element protein 2.	HORMA domain containing 1.	0.442
LOC103464578	spata22	ENSPREP00000000695	ENSPREP00000008354	Synaptonemal complex central element protein 2.	Spermatogenesis associated 22.	0.470
LOC103464578	spo11	ENSPREP00000000695	ENSPREP00000011861	Synaptonemal complex central element protein 2.	SPO11 initiator of meiotic double stranded breaks.	0.549
LOC103464578	sycp3	ENSPREP00000000695	ENSPREP00000029907	Synaptonemal complex central element protein 2.	Synaptonemal complex protein 3.	0.637
Mei1	LOC103464578	ENSPREP00000024676	ENSPREP00000000695	Uncharacterized protein.	Synaptonemal complex central element protein 2.	0.418
Mei1	hormad1	ENSPREP00000024676	ENSPREP00000028947	Uncharacterized protein.	HORMA domain containing 1.	0.524
Mei1	spo11	ENSPREP00000024676	ENSPREP00000011861	Uncharacterized protein.	SPO11 initiator of meiotic double stranded breaks.	0.549
Syce3	LOC103464578	ENSPREP00000030075	ENSPREP00000000695	Uncharacterized protein.	Synaptonemal complex central element protein 2.	0.854
Syce3	hormad1	ENSPREP00000030075	ENSPREP00000028947	Uncharacterized protein.	HORMA domain containing 1.	0.465
Syce3	spata22	ENSPREP00000030075	ENSPREP00000008354	Uncharacterized protein.	Spermatogenesis associated 22.	0.544
Syce3	sycp3	ENSPREP00000030075	ENSPREP00000029907	Uncharacterized protein.	Synaptonemal complex protein 3.	0.637
TMC6	sycp3	ENSPREP00000000581	ENSPREP00000029907	Transmembrane channel-like protein.	Synaptonemal complex protein 3.	0.626
TMC6	tcte1	ENSPREP00000000581	ENSPREP00000012348	Transmembrane channel-like protein.	T-complex-associated-testis-expressed 1.	0.675
ccnb1ip1	spo11	ENSPREP00000007760	ENSPREP00000011861	Cyclin B1 interacting protein 1.	SPO11 initiator of meiotic double stranded breaks.	0.525
ccnb1ip1	tex11	ENSPREP00000007760	ENSPREP00000013731	Cyclin B1 interacting protein 1.	Testis expressed 11.	0.485
hormad1	LOC103464578	ENSPREP00000028947	ENSPREP00000000695	HORMA domain containing 1.	Synaptonemal complex central element protein 2.	0.442