(5 nodes) Cyclin Y, and PITH domain network (Poecilia reticulata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103478740	Cyclin Y-like 1; Belongs to the cyclin family. (344 aa)
	plekhm3	Pleckstrin homology domain containing, family M, member 3. (817 aa)
	pithd1	PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1. (211 aa)
	ccnyl1	Cyclin Y like 1; Belongs to the cyclin family. (341 aa)
	LOC103479951	CYCLIN domain-containing protein; Belongs to the cyclin family. (298 aa)

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103478740	pithd1	ENSPREP00000005825	ENSPREP00000011937	Cyclin Y-like 1; Belongs to the cyclin family.	PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1.	0.722
LOC103478740	plekhm3	ENSPREP00000005825	ENSPREP00000005864	Cyclin Y-like 1; Belongs to the cyclin family.	Pleckstrin homology domain containing, family M, member 3.	0.681
LOC103479951	pithd1	ENSPREP00000027550	ENSPREP00000011937	CYCLIN domain-containing protein; Belongs to the cyclin family.	PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1.	0.640
ccnyl1	pithd1	ENSPREP00000025035	ENSPREP00000011937	Cyclin Y like 1; Belongs to the cyclin family.	PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1.	0.730
pithd1	LOC103478740	ENSPREP00000011937	ENSPREP00000005825	PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1.	Cyclin Y-like 1; Belongs to the cyclin family.	0.722
pithd1	LOC103479951	ENSPREP00000011937	ENSPREP00000027550	PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.640
pithd1	ccnyl1	ENSPREP00000011937	ENSPREP00000025035	PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1.	Cyclin Y like 1; Belongs to the cyclin family.	0.730
plekhm3	LOC103478740	ENSPREP00000005864	ENSPREP00000005825	Pleckstrin homology domain containing, family M, member 3.	Cyclin Y-like 1; Belongs to the cyclin family.	0.681