(12 nodes) Class I peroxisomal membrane protein import network (Poecilia reticulata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	pex19	Peroxisomal biogenesis factor 19. (283 aa)
	atad1	ATPase family AAA domain containing 1b; Belongs to the AAA ATPase family. (365 aa)
	abcd3	ATP-binding cassette, sub-family D (ALD), member 3a. (659 aa)
	pex11a	Peroxisomal biogenesis factor 11 alpha. (246 aa)
	LOC103469214	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (315 aa)
	abcd2	ATP-binding cassette, sub-family D (ALD), member 2. (790 aa)
	pex16	Peroxisomal membrane protein PEX16. (300 aa)
	pex11g	Peroxisomal biogenesis factor 11 gamma. (254 aa)
	pex3	Peroxisomal biogenesis factor 3. (360 aa)
	slc25a17	Solute carrier family 25 member 17; Belongs to the mitochondrial carrier (TC 2.A.29) family. (312 aa)
	pex11b	Peroxisomal biogenesis factor 11 beta. (261 aa)
	pxmp2	Peroxisomal membrane protein 2; Belongs to the peroxisomal membrane protein PXMP2/4 family. (194 aa)

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103469214	abcd2	ENSPREP00000009765	ENSPREP00000011112	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	ATP-binding cassette, sub-family D (ALD), member 2.	0.632
LOC103469214	abcd3	ENSPREP00000009765	ENSPREP00000008027	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	ATP-binding cassette, sub-family D (ALD), member 3a.	0.717
LOC103469214	atad1	ENSPREP00000009765	ENSPREP00000002374	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	ATPase family AAA domain containing 1b; Belongs to the AAA ATPase family.	0.586
LOC103469214	pex11a	ENSPREP00000009765	ENSPREP00000009677	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Peroxisomal biogenesis factor 11 alpha.	0.643
LOC103469214	pex11b	ENSPREP00000009765	ENSPREP00000029865	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Peroxisomal biogenesis factor 11 beta.	0.643
LOC103469214	pex11g	ENSPREP00000009765	ENSPREP00000016101	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Peroxisomal biogenesis factor 11 gamma.	0.599
LOC103469214	pex16	ENSPREP00000009765	ENSPREP00000012233	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Peroxisomal membrane protein PEX16.	0.747
LOC103469214	pex19	ENSPREP00000009765	ENSPREP00000001567	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Peroxisomal biogenesis factor 19.	0.851
LOC103469214	pex3	ENSPREP00000009765	ENSPREP00000020654	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Peroxisomal biogenesis factor 3.	0.714
LOC103469214	pxmp2	ENSPREP00000009765	ENSPREP00000032787	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Peroxisomal membrane protein 2; Belongs to the peroxisomal membrane protein PXMP2/4 family.	0.667
LOC103469214	slc25a17	ENSPREP00000009765	ENSPREP00000029342	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Solute carrier family 25 member 17; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.901
abcd2	LOC103469214	ENSPREP00000011112	ENSPREP00000009765	ATP-binding cassette, sub-family D (ALD), member 2.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.632
abcd2	abcd3	ENSPREP00000011112	ENSPREP00000008027	ATP-binding cassette, sub-family D (ALD), member 2.	ATP-binding cassette, sub-family D (ALD), member 3a.	0.788
abcd2	atad1	ENSPREP00000011112	ENSPREP00000002374	ATP-binding cassette, sub-family D (ALD), member 2.	ATPase family AAA domain containing 1b; Belongs to the AAA ATPase family.	0.617
abcd2	pex11a	ENSPREP00000011112	ENSPREP00000009677	ATP-binding cassette, sub-family D (ALD), member 2.	Peroxisomal biogenesis factor 11 alpha.	0.665
abcd2	pex11b	ENSPREP00000011112	ENSPREP00000029865	ATP-binding cassette, sub-family D (ALD), member 2.	Peroxisomal biogenesis factor 11 beta.	0.665
abcd2	pex11g	ENSPREP00000011112	ENSPREP00000016101	ATP-binding cassette, sub-family D (ALD), member 2.	Peroxisomal biogenesis factor 11 gamma.	0.609
abcd2	pex16	ENSPREP00000011112	ENSPREP00000012233	ATP-binding cassette, sub-family D (ALD), member 2.	Peroxisomal membrane protein PEX16.	0.718
abcd2	pex19	ENSPREP00000011112	ENSPREP00000001567	ATP-binding cassette, sub-family D (ALD), member 2.	Peroxisomal biogenesis factor 19.	0.836
abcd2	pex3	ENSPREP00000011112	ENSPREP00000020654	ATP-binding cassette, sub-family D (ALD), member 2.	Peroxisomal biogenesis factor 3.	0.792