(12 nodes) Protein import into peroxisome matrix network (Poecilia reticulata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103460472	Peroxisomal biogenesis factor 5-like b. (563 aa)
	pex1	Peroxisomal biogenesis factor 1. (1207 aa)
	pex12	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family. (349 aa)
	pex10	Peroxisomal biogenesis factor 10. (323 aa)
	pex5	Peroxisomal biogenesis factor 5. (639 aa)
	LOC103464006	Sterol carrier protein 2b. (203 aa)
	pex7	Peroxisomal biogenesis factor 7. (340 aa)
	ephx2	Epoxide hydrolase 2, cytoplasmic. (561 aa)
	pex14	Peroxisomal biogenesis factor 14. (374 aa)
	pex2	Peroxisomal biogenesis factor 2. (335 aa)
	fam185a	Family with sequence similarity 185 member A. (386 aa)
	pex6	Peroxisomal biogenesis factor 6. (1057 aa)

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103460472	LOC103464006	ENSPREP00000001447	ENSPREP00000019895	Peroxisomal biogenesis factor 5-like b.	Sterol carrier protein 2b.	0.996
LOC103460472	ephx2	ENSPREP00000001447	ENSPREP00000021989	Peroxisomal biogenesis factor 5-like b.	Epoxide hydrolase 2, cytoplasmic.	0.952
LOC103460472	fam185a	ENSPREP00000001447	ENSPREP00000024036	Peroxisomal biogenesis factor 5-like b.	Family with sequence similarity 185 member A.	0.883
LOC103460472	pex1	ENSPREP00000001447	ENSPREP00000006878	Peroxisomal biogenesis factor 5-like b.	Peroxisomal biogenesis factor 1.	0.840
LOC103460472	pex10	ENSPREP00000001447	ENSPREP00000009344	Peroxisomal biogenesis factor 5-like b.	Peroxisomal biogenesis factor 10.	0.868
LOC103460472	pex12	ENSPREP00000001447	ENSPREP00000009322	Peroxisomal biogenesis factor 5-like b.	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	0.946
LOC103460472	pex14	ENSPREP00000001447	ENSPREP00000023963	Peroxisomal biogenesis factor 5-like b.	Peroxisomal biogenesis factor 14.	0.995
LOC103460472	pex2	ENSPREP00000001447	ENSPREP00000023986	Peroxisomal biogenesis factor 5-like b.	Peroxisomal biogenesis factor 2.	0.752
LOC103460472	pex6	ENSPREP00000001447	ENSPREP00000029806	Peroxisomal biogenesis factor 5-like b.	Peroxisomal biogenesis factor 6.	0.841
LOC103460472	pex7	ENSPREP00000001447	ENSPREP00000020948	Peroxisomal biogenesis factor 5-like b.	Peroxisomal biogenesis factor 7.	0.993
LOC103464006	LOC103460472	ENSPREP00000019895	ENSPREP00000001447	Sterol carrier protein 2b.	Peroxisomal biogenesis factor 5-like b.	0.996
LOC103464006	ephx2	ENSPREP00000019895	ENSPREP00000021989	Sterol carrier protein 2b.	Epoxide hydrolase 2, cytoplasmic.	0.723
LOC103464006	fam185a	ENSPREP00000019895	ENSPREP00000024036	Sterol carrier protein 2b.	Family with sequence similarity 185 member A.	0.958
LOC103464006	pex10	ENSPREP00000019895	ENSPREP00000009344	Sterol carrier protein 2b.	Peroxisomal biogenesis factor 10.	0.963
LOC103464006	pex12	ENSPREP00000019895	ENSPREP00000009322	Sterol carrier protein 2b.	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	0.958
LOC103464006	pex14	ENSPREP00000019895	ENSPREP00000023963	Sterol carrier protein 2b.	Peroxisomal biogenesis factor 14.	0.958
LOC103464006	pex2	ENSPREP00000019895	ENSPREP00000023986	Sterol carrier protein 2b.	Peroxisomal biogenesis factor 2.	0.967
LOC103464006	pex5	ENSPREP00000019895	ENSPREP00000018308	Sterol carrier protein 2b.	Peroxisomal biogenesis factor 5.	0.996
LOC103464006	pex6	ENSPREP00000019895	ENSPREP00000029806	Sterol carrier protein 2b.	Peroxisomal biogenesis factor 6.	0.685
ephx2	LOC103460472	ENSPREP00000021989	ENSPREP00000001447	Epoxide hydrolase 2, cytoplasmic.	Peroxisomal biogenesis factor 5-like b.	0.952