STRINGSTRING
got2 got2 LOC103461196 LOC103461196 ddo ddo nit2 nit2 LOC103469884 LOC103469884 GOT1 GOT1 LOC103476495 LOC103476495
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
got2Aspartate aminotransferase. (393 aa)
LOC103461196Amine oxidase. (512 aa)
ddoZgc:172341. (338 aa)
nit2Nitrilase family, member 2. (269 aa)
LOC103469884Malate dehydrogenase. (333 aa)
GOT1Aspartate aminotransferase. (463 aa)
LOC103476495Malate dehydrogenase. (333 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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