STRINGSTRING
acp5 acp5 nudt13 nudt13 hdhd3 hdhd3 nudt12 nudt12 rfk rfk nadsyn1 nadsyn1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
acp5Tartrate-resistant acid phosphatase type 5. (333 aa)
nudt13Nudix (nucleoside diphosphate linked moiety X)-type motif 13. (348 aa)
hdhd3Haloacid dehalogenase-like hydrolase domain containing 3. (243 aa)
nudt12Nudix (nucleoside diphosphate linked moiety X)-type motif 12. (462 aa)
rfkRiboflavin kinase. (185 aa)
nadsyn1Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family. (663 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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