(16 nodes) NuRD complex, and Methyl-CpG binding protein 2/3, C-terminal domain network (Poecilia reticulata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103472838	Chromodomain helicase DNA binding protein 4a. (1967 aa)
	aire	Autoimmune regulator. (496 aa)
	LOC103480197	GATA-type domain-containing protein. (406 aa)
	mta3	Metastasis associated 1 family, member 3. (699 aa)
	LOC103463694	GATA zinc finger domain containing 2Ab. (591 aa)
	LOC103463654	Methyl-CpG binding domain protein 3a. (274 aa)
	chd3	Chromodomain helicase DNA binding protein 3. (1830 aa)
	chd4	Uncharacterized protein. (1981 aa)
	ENSPREP00000018784	Uncharacterized protein. (565 aa)
	LOC103460987	Metastasis associated 1 family, member 2. (332 aa)
	LOC103460256	Methyl-CpG binding domain protein 2. (302 aa)
	mta1	Metastasis associated 1. (584 aa)
	chd5	Uncharacterized protein. (1804 aa)
	LOC103479450	Uncharacterized protein. (251 aa)
	LOC103479433	Uncharacterized protein. (621 aa)
	gatad2b	GATA zinc finger domain containing 2B. (589 aa)

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPREP00000018784	LOC103460256	ENSPREP00000018784	ENSPREP00000019886	Uncharacterized protein.	Methyl-CpG binding domain protein 2.	0.634
ENSPREP00000018784	LOC103460987	ENSPREP00000018784	ENSPREP00000019199	Uncharacterized protein.	Metastasis associated 1 family, member 2.	0.665
ENSPREP00000018784	LOC103463654	ENSPREP00000018784	ENSPREP00000012581	Uncharacterized protein.	Methyl-CpG binding domain protein 3a.	0.634
ENSPREP00000018784	LOC103472838	ENSPREP00000018784	ENSPREP00000001767	Uncharacterized protein.	Chromodomain helicase DNA binding protein 4a.	0.697
ENSPREP00000018784	LOC103479450	ENSPREP00000018784	ENSPREP00000026259	Uncharacterized protein.	Uncharacterized protein.	0.634
ENSPREP00000018784	LOC103480197	ENSPREP00000018784	ENSPREP00000005870	Uncharacterized protein.	GATA-type domain-containing protein.	0.665
ENSPREP00000018784	aire	ENSPREP00000018784	ENSPREP00000003639	Uncharacterized protein.	Autoimmune regulator.	0.697
ENSPREP00000018784	chd3	ENSPREP00000018784	ENSPREP00000016390	Uncharacterized protein.	Chromodomain helicase DNA binding protein 3.	0.697
ENSPREP00000018784	chd4	ENSPREP00000018784	ENSPREP00000016795	Uncharacterized protein.	Uncharacterized protein.	0.697
ENSPREP00000018784	chd5	ENSPREP00000018784	ENSPREP00000021169	Uncharacterized protein.	Uncharacterized protein.	0.697
ENSPREP00000018784	mta1	ENSPREP00000018784	ENSPREP00000019896	Uncharacterized protein.	Metastasis associated 1.	0.665
ENSPREP00000018784	mta3	ENSPREP00000018784	ENSPREP00000007311	Uncharacterized protein.	Metastasis associated 1 family, member 3.	0.665
LOC103460256	ENSPREP00000018784	ENSPREP00000019886	ENSPREP00000018784	Methyl-CpG binding domain protein 2.	Uncharacterized protein.	0.634
LOC103460256	LOC103460987	ENSPREP00000019886	ENSPREP00000019199	Methyl-CpG binding domain protein 2.	Metastasis associated 1 family, member 2.	0.767
LOC103460256	LOC103463694	ENSPREP00000019886	ENSPREP00000010529	Methyl-CpG binding domain protein 2.	GATA zinc finger domain containing 2Ab.	0.715
LOC103460256	LOC103472838	ENSPREP00000019886	ENSPREP00000001767	Methyl-CpG binding domain protein 2.	Chromodomain helicase DNA binding protein 4a.	0.709
LOC103460256	LOC103479433	ENSPREP00000019886	ENSPREP00000026795	Methyl-CpG binding domain protein 2.	Uncharacterized protein.	0.715
LOC103460256	LOC103480197	ENSPREP00000019886	ENSPREP00000005870	Methyl-CpG binding domain protein 2.	GATA-type domain-containing protein.	0.767
LOC103460256	aire	ENSPREP00000019886	ENSPREP00000003639	Methyl-CpG binding domain protein 2.	Autoimmune regulator.	0.709
LOC103460256	chd3	ENSPREP00000019886	ENSPREP00000016390	Methyl-CpG binding domain protein 2.	Chromodomain helicase DNA binding protein 3.	0.709