STRINGSTRING
LOC103476782 LOC103476782 LOC103479272 LOC103479272 LOC103479279 LOC103479279 gbx2 gbx2 gdnf gdnf LOC103477509 LOC103477509 sema6a sema6a sema3d sema3d sema3a sema3a sema3e sema3e sema5a sema5a LOC103471985 LOC103471985 LOC103460487 LOC103460487 LOC103460449 LOC103460449 SEMA4D SEMA4D LOC103472534 LOC103472534 rax rax LOC103476866 LOC103476866 LOC103481932 LOC103481932 sema4c sema4c tbx1 tbx1 nusap1 nusap1 LOC103477638 LOC103477638 sema6c sema6c LOC103465510 LOC103465510 colec11 colec11 LOC103470946 LOC103470946 coro1c coro1c sema3c sema3c LOC103471340 LOC103471340 ENSPREP00000018776 ENSPREP00000018776 sema4a sema4a LOC103473740 LOC103473740 LOC103475124 LOC103475124 LOC103474228 LOC103474228 LOC103479763 LOC103479763 sema6d sema6d sema4g sema4g COLEC10 COLEC10 ENSPREP00000014932 ENSPREP00000014932 LOC103464644 LOC103464644 FOXC1 FOXC1 ENSPREP00000014353 ENSPREP00000014353 sema6b sema6b LOC103463401 LOC103463401 wdr11 wdr11 med13 med13 LOC103463647 LOC103463647 rcc2 rcc2 edn1 edn1 LOC103478449 LOC103478449 LOC103462612 LOC103462612 tbx10 tbx10 phox2b phox2b LOC103466628 LOC103466628 htr2b htr2b LOC103463726 LOC103463726 anxa6 anxa6 LOC103479553 LOC103479553 nrp1 nrp1 LOC103459977 LOC103459977 LOC103462179 LOC103462179 CDH2 CDH2 smo smo sema3g sema3g sema3f sema3f sema3b sema3b alx1 alx1 sema5b sema5b EDNRA EDNRA LOC103472553 LOC103472553 cep41 cep41 pdgfrb pdgfrb LOC103459228 LOC103459228 ret ret LOC103459074 LOC103459074 LOC103478941 LOC103478941 fgf19 fgf19 SEMA4F SEMA4F radil radil
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103476782Uncharacterized protein. (1079 aa)
LOC103479272Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Ba; Belongs to the semaphorin family. (899 aa)
LOC103479279Semaphorin 4e; Belongs to the semaphorin family. (759 aa)
gbx2Gastrulation brain homeobox 2. (339 aa)
gdnfGlial cell line-derived neurotrophic factor; Neurotrophic factor that enhances survival and morphological differentiation of dopaminergic neurons and increases their high- affinity dopamine uptake. (229 aa)
LOC103477509Uncharacterized protein; Belongs to the semaphorin family. (572 aa)
sema6aSemaphorin 6A; Belongs to the semaphorin family. (1011 aa)
sema3dSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D; Belongs to the semaphorin family. (794 aa)
sema3aSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab; Belongs to the semaphorin family. (799 aa)
sema3eSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E; Belongs to the semaphorin family. (675 aa)
sema5aSema domain-containing protein. (1153 aa)
LOC103471985Phosphatase and actin regulator 4a. (1141 aa)
LOC103460487Fibronectin 1a. (2502 aa)
LOC103460449Neuropilin; Belongs to the neuropilin family. (936 aa)
SEMA4DSemaphorin 4D; Belongs to the semaphorin family. (900 aa)
LOC103472534Sema domain-containing protein; Belongs to the semaphorin family. (1152 aa)
raxRetinal homeobox gene 3. (310 aa)
LOC103476866Uncharacterized protein; Belongs to the semaphorin family. (887 aa)
LOC103481932Si:ch211-176g6.2. (1247 aa)
sema4cUncharacterized protein; Belongs to the semaphorin family. (863 aa)
tbx1T-box transcription factor 1. (498 aa)
nusap1Nucleolar and spindle associated protein 1. (434 aa)
LOC103477638Si:ch211-113g11.6; Belongs to the semaphorin family. (609 aa)
sema6cSema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E; Belongs to the semaphorin family. (1086 aa)
LOC103465510Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fb; Belongs to the semaphorin family. (699 aa)
colec11Collectin sub-family member 11. (381 aa)
LOC103470946G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (423 aa)
coro1cCoronin; Belongs to the WD repeat coronin family. (465 aa)
sema3cSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C; Belongs to the semaphorin family. (746 aa)
LOC103471340Endothelin receptor type Aa; Belongs to the G-protein coupled receptor 1 family. (440 aa)
ENSPREP00000018776Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (824 aa)
sema4aSema domain-containing protein; Belongs to the semaphorin family. (815 aa)
LOC103473740Coronin; Belongs to the WD repeat coronin family. (459 aa)
LOC103475124Sema domain-containing protein. (1092 aa)
LOC103474228Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (2110 aa)
LOC103479763Neurturin. (215 aa)
sema6dSema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D, like; Belongs to the semaphorin family. (1048 aa)
sema4gUncharacterized protein; Belongs to the semaphorin family. (883 aa)
COLEC10Collectin subfamily member 10. (238 aa)
ENSPREP00000014932Forkhead box C1. (275 aa)
LOC103464644Si:dkey-49n23.1; Belongs to the semaphorin family. (731 aa)
FOXC1Forkhead box C1. (471 aa)
ENSPREP00000014353Semaphorin 7A; Belongs to the semaphorin family. (366 aa)
sema6bSema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Bb; Belongs to the semaphorin family. (870 aa)
LOC103463401Phosphatase and actin regulator. (570 aa)
wdr11WD repeat domain 11. (1240 aa)
med13Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (2158 aa)
LOC103463647Forkhead box Q2. (289 aa)
rcc2Regulator of chromosome condensation 2. (494 aa)
edn1Endothelin 1. (207 aa)
LOC103478449Phosphatase and actin regulator. (879 aa)
LOC103462612Uncharacterized protein; Belongs to the semaphorin family. (615 aa)
tbx10Uncharacterized protein. (280 aa)
phox2bPaired like homeobox 2Bb. (285 aa)
LOC103466628Sema domain-containing protein; Belongs to the semaphorin family. (834 aa)
htr2b5-hydroxytryptamine (serotonin) receptor 2B, G protein-coupled. (466 aa)
LOC103463726Si:ch211-129c21.1; Belongs to the semaphorin family. (759 aa)
anxa6Annexin. (665 aa)
LOC103479553Phosphatase and actin regulator. (548 aa)
nrp1Neuropilin; Belongs to the neuropilin family. (903 aa)
LOC103459977Sema domain-containing protein; Belongs to the semaphorin family. (625 aa)
LOC103462179Sema domain-containing protein; Belongs to the semaphorin family. (838 aa)
CDH2Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins. (865 aa)
smoSmoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. (811 aa)
sema3gSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3bl; Belongs to the semaphorin family. (784 aa)
sema3fSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa; Belongs to the semaphorin family. (790 aa)
sema3bSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B; Belongs to the semaphorin family. (809 aa)
alx1ALX homeobox 1. (323 aa)
sema5bSema domain-containing protein. (1032 aa)
EDNRAEndothelin receptor type A; Belongs to the G-protein coupled receptor 1 family. (372 aa)
LOC103472553SH3 and PX domains 2Aa. (1173 aa)
cep41Centrosomal protein 41. (369 aa)
pdgfrbPlatelet-derived growth factor receptor, beta polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1040 aa)
LOC103459228Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Aa; Belongs to the semaphorin family. (856 aa)
retProto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands. (1118 aa)
LOC103459074Endothelin receptor type Bb; Belongs to the G-protein coupled receptor 1 family. (424 aa)
LOC103478941Endothelin receptor Ba; Belongs to the G-protein coupled receptor 1 family. (467 aa)
fgf19Fibroblast growth factor 19; Belongs to the heparin-binding growth factors family. (196 aa)
SEMA4FSsemaphorin 4F; Belongs to the semaphorin family. (841 aa)
radilRas association and DIL domains. (1164 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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