(49 nodes) Photoreceptor inner segment network (Poecilia reticulata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103477017	Si:dkey-103j14.5. (311 aa)
	LOC103472858	Recoverin 3. (192 aa)
	myo3a	Myosin IIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1787 aa)
	kifap3	Kinesin-associated protein 3a. (745 aa)
	rcvrn	Recoverin a. (203 aa)
	myo3b	Myosin IIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1265 aa)
	gnat1	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1. (350 aa)
	cerkl	Ceramide kinase-like. (529 aa)
	guca1b	Guanylate cyclase activator 1B. (211 aa)
	pcare	Uncharacterized protein. (1131 aa)
	crocc	Uncharacterized protein. (2007 aa)
	adgrv1	Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family. (6188 aa)
	ENSPREP00000008634	Uncharacterized protein. (690 aa)
	bbs4	Bardet-Biedl syndrome 4. (520 aa)
	ENSPREP00000009710	Uncharacterized protein. (2328 aa)
	rd3	Retinal degeneration 3, GUCY2D regulator. (215 aa)
	bsg	Basigin. (390 aa)
	guk1	Guanylate kinase 1a. (211 aa)
	mpp5	Membrane protein, palmitoylated 5b (MAGUK p55 subfamily member 5); Belongs to the MAGUK family. (650 aa)
	LOC103478050	Recoverin 2. (193 aa)
	ENSPREP00000013704	Uncharacterized protein. (155 aa)
	LOC103460864	Uncharacterized protein; Belongs to the MAGUK family. (538 aa)
	asrgl1	Asparaginase like 1. (346 aa)
	fam161b	FAM161 centrosomal protein B. (555 aa)
	LOC103466075	Membrane associated guanylate kinase, WW and PDZ domain containing 2b. (1538 aa)
	LOC103458439	Receptor expression-enhancing protein. (184 aa)
	ENSPREP00000017400	SEA domain-containing protein. (1271 aa)
	ush2a	Usher syndrome 2A (autosomal recessive, mild). (4818 aa)
	LOC103463303	Crumbs cell polarity complex component 1. (1334 aa)
	crb2	Crumbs cell polarity complex component 2b. (1343 aa)
	LOC103473166	Uncharacterized protein. (1465 aa)
	ENSPREP00000020403	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (157 aa)
	Kif17	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (241 aa)
	LOC103479309	Kinesin-associated protein 3b. (807 aa)
	LOC103467179	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2. (350 aa)
	usp45	Ubiquitin carboxyl-terminal hydrolase. (821 aa)
	LOC103464121	Guanylate kinase 1b. (233 aa)
	ENSPREP00000024139	RP1 axonemal microtubule associated. (235 aa)
	LOC103469622	Whirlin b. (978 aa)
	RS1	Retinoschisin 1. (181 aa)
	ENSPREP00000027213	Uncharacterized protein. (1804 aa)
	clg16h8orf37	Uncharacterized protein. (154 aa)
	ENSPREP00000028725	F5/8 type C domain-containing protein. (177 aa)
	ush1c	Usher syndrome 1C. (553 aa)
	LOC103458000	Uncharacterized protein. (900 aa)
	whrn	Whirlin a. (828 aa)
	LOC103458803	Interphotoreceptor matrix proteoglycan 1. (967 aa)
	guca1a	Guanylate cyclase activator 1A. (182 aa)
	magi2	Membrane associated guanylate kinase, WW and PDZ domain containing 2a. (1287 aa)

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPREP00000008634	ENSPREP00000013704	ENSPREP00000008634	ENSPREP00000013704	Uncharacterized protein.	Uncharacterized protein.	0.593
ENSPREP00000008634	LOC103460864	ENSPREP00000008634	ENSPREP00000013760	Uncharacterized protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.593
ENSPREP00000008634	mpp5	ENSPREP00000008634	ENSPREP00000012779	Uncharacterized protein.	Membrane protein, palmitoylated 5b (MAGUK p55 subfamily member 5); Belongs to the MAGUK family.	0.593
ENSPREP00000013704	ENSPREP00000008634	ENSPREP00000013704	ENSPREP00000008634	Uncharacterized protein.	Uncharacterized protein.	0.593
ENSPREP00000013704	LOC103460864	ENSPREP00000013704	ENSPREP00000013760	Uncharacterized protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.854
ENSPREP00000013704	LOC103463303	ENSPREP00000013704	ENSPREP00000018076	Uncharacterized protein.	Crumbs cell polarity complex component 1.	0.593
ENSPREP00000013704	LOC103473166	ENSPREP00000013704	ENSPREP00000019907	Uncharacterized protein.	Uncharacterized protein.	0.593
ENSPREP00000013704	crb2	ENSPREP00000013704	ENSPREP00000019872	Uncharacterized protein.	Crumbs cell polarity complex component 2b.	0.593
ENSPREP00000020403	Kif17	ENSPREP00000020403	ENSPREP00000020430	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.925
ENSPREP00000020403	LOC103479309	ENSPREP00000020403	ENSPREP00000021322	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-associated protein 3b.	0.516
ENSPREP00000020403	kifap3	ENSPREP00000020403	ENSPREP00000004180	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-associated protein 3a.	0.516
ENSPREP00000027213	crocc	ENSPREP00000027213	ENSPREP00000007507	Uncharacterized protein.	Uncharacterized protein.	0.433
Kif17	ENSPREP00000020403	ENSPREP00000020430	ENSPREP00000020403	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.925
Kif17	LOC103479309	ENSPREP00000020430	ENSPREP00000021322	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-associated protein 3b.	0.516
Kif17	kifap3	ENSPREP00000020430	ENSPREP00000004180	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-associated protein 3a.	0.516
LOC103458000	guca1b	ENSPREP00000031066	ENSPREP00000007120	Uncharacterized protein.	Guanylate cyclase activator 1B.	0.401
LOC103460864	ENSPREP00000008634	ENSPREP00000013760	ENSPREP00000008634	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.593
LOC103460864	ENSPREP00000013704	ENSPREP00000013760	ENSPREP00000013704	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.854
LOC103460864	LOC103463303	ENSPREP00000013760	ENSPREP00000018076	Uncharacterized protein; Belongs to the MAGUK family.	Crumbs cell polarity complex component 1.	0.593
LOC103460864	LOC103473166	ENSPREP00000013760	ENSPREP00000019907	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.593