STRINGSTRING
pla1a pla1a ccdc136 ccdc136 Cav1 Cav1 bsg bsg LOC103465217 LOC103465217 tekt3 tekt3 cfap65 cfap65 trip11 trip11 VPS13B VPS13B
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pla1aPhospholipase A1 member A. (485 aa)
ccdc136Coiled-coil domain containing 136b. (384 aa)
Cav1Uncharacterized protein. (84 aa)
bsgBasigin. (390 aa)
LOC103465217Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (159 aa)
tekt3Tektin 3. (487 aa)
cfap65Si:ch1073-349o24.2. (1707 aa)
trip11Thyroid hormone receptor interactor 11. (1842 aa)
VPS13BVacuolar protein sorting 13 homolog B. (3878 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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