27 items (Poecilia reticulata) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

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Predicted Interactions

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Your Input:
	gtf2h4	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (434 aa)
	ENSPREP00000001027	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (467 aa)
	LOC103459886	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (253 aa)
	taf13	TATA-box binding protein associated factor 13. (188 aa)
	taf6l	TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor. (639 aa)
	Taf12	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (159 aa)
	taf11	TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (196 aa)
	gtf2b	General transcription factor IIB. (318 aa)
	ENSPREP00000011339	TAF4 domain-containing protein. (249 aa)
	TAF4	TATA-box binding protein associated factor 4. (878 aa)
	taf3	TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto. (896 aa)
	gtf2a2	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (109 aa)
	tbp	TATA box binding protein. (301 aa)
	gtf2e2	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (287 aa)
	taf2	TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (1119 aa)
	taf7l	TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (383 aa)
	gtf2e1	General transcription factor IIE, polypeptide 1, alpha. (462 aa)
	LOC103481886	Uncharacterized protein. (302 aa)
	LOC103465090	TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor. (852 aa)
	LOC103466384	TAFH domain-containing protein. (863 aa)
	taf10	TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (186 aa)
	gtf2a1	General transcription factor IIA, 1. (393 aa)
	ercc2	Excision repair cross-complementation group 2. (655 aa)
	gtf2h3	General transcription factor IIH, polypeptide 3. (277 aa)
	taf8	TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (243 aa)
	LOC103475759	Transcription initiation factor TFIID subunit. (1985 aa)
	taf6	TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (637 aa)

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPREP00000001027	ENSPREP00000011339	ENSPREP00000001027	ENSPREP00000011339	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	TAF4 domain-containing protein.	0.761
ENSPREP00000001027	LOC103459886	ENSPREP00000001027	ENSPREP00000004559	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.848
ENSPREP00000001027	LOC103465090	ENSPREP00000001027	ENSPREP00000024331	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.761
ENSPREP00000001027	LOC103466384	ENSPREP00000001027	ENSPREP00000024912	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	TAFH domain-containing protein.	0.761
ENSPREP00000001027	LOC103475759	ENSPREP00000001027	ENSPREP00000032525	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	Transcription initiation factor TFIID subunit.	0.964
ENSPREP00000001027	LOC103481886	ENSPREP00000001027	ENSPREP00000023547	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	Uncharacterized protein.	0.897
ENSPREP00000001027	TAF4	ENSPREP00000001027	ENSPREP00000011437	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	TATA-box binding protein associated factor 4.	0.761
ENSPREP00000001027	Taf12	ENSPREP00000001027	ENSPREP00000007202	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.894
ENSPREP00000001027	ercc2	ENSPREP00000001027	ENSPREP00000028527	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	Excision repair cross-complementation group 2.	0.966
ENSPREP00000001027	gtf2a1	ENSPREP00000001027	ENSPREP00000027319	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	General transcription factor IIA, 1.	0.959
ENSPREP00000001027	gtf2a2	ENSPREP00000001027	ENSPREP00000013132	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.980
ENSPREP00000001027	gtf2b	ENSPREP00000001027	ENSPREP00000011330	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	General transcription factor IIB.	0.995
ENSPREP00000001027	gtf2e1	ENSPREP00000001027	ENSPREP00000021965	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	General transcription factor IIE, polypeptide 1, alpha.	0.996
ENSPREP00000001027	gtf2e2	ENSPREP00000001027	ENSPREP00000015550	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	0.991
ENSPREP00000001027	gtf2h3	ENSPREP00000001027	ENSPREP00000030691	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	General transcription factor IIH, polypeptide 3.	0.975
ENSPREP00000001027	gtf2h4	ENSPREP00000001027	ENSPREP00000029112	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.981
ENSPREP00000001027	taf10	ENSPREP00000001027	ENSPREP00000025580	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.850
ENSPREP00000001027	taf11	ENSPREP00000001027	ENSPREP00000007898	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.956
ENSPREP00000001027	taf13	ENSPREP00000001027	ENSPREP00000005745	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	TATA-box binding protein associated factor 13.	0.867
ENSPREP00000001027	taf2	ENSPREP00000001027	ENSPREP00000015959	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.959