STRINGSTRING
cpsf1 cpsf1 LOC103457156 LOC103457156 ENSPREP00000018529 ENSPREP00000018529 cstf2 cstf2 ENSPREP00000007025 ENSPREP00000007025 CPSF3 CPSF3 cpsf6 cpsf6 tmem240 tmem240 cpsf2 cpsf2 zc3h3 zc3h3 sympk sympk CPSF7 CPSF7 WDR33 WDR33 ssu72 ssu72 cpsf4 cpsf4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cpsf1Cleavage and polyadenylation specific factor 1. (1471 aa)
LOC103457156Cleavage and polyadenylation specific factor 3. (627 aa)
ENSPREP00000018529FIP1 like 1b (S. cerevisiae). (435 aa)
cstf2Cleavage stimulation factor, 3' pre-RNA, subunit 2. (556 aa)
ENSPREP00000007025Uncharacterized protein. (263 aa)
CPSF3Cleavage and polyadenylation specific factor 3. (653 aa)
cpsf6Cleavage and polyadenylation specific factor 6. (586 aa)
tmem240Transmembrane protein 240a. (175 aa)
cpsf2Cleavage and polyadenylation specificity factor subunit 2. (787 aa)
zc3h3Zinc finger CCCH-type containing 3. (890 aa)
sympkSymplekin. (1220 aa)
CPSF7Cleavage and polyadenylation specific factor 7. (451 aa)
WDR33WD repeat domain 33. (893 aa)
ssu72SSU72 homolog, RNA polymerase II CTD phosphatase. (194 aa)
cpsf4Cleavage and polyadenylation specific factor 4. (262 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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